RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 LAS2Q8IYD9 372 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 CA13Q8N1Q1 262 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 METTL21AQ8WXB1 218 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 TSLPQ969D9 159 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 THOC3Q96J01 351 aaKnown RBP10.54□□□□□ -0.72
SMAD4-211ENST00000590499 AGAP4Q96P64 663 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 QRFPRQ96P65 431 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 TUBB6Q9BUF5 446 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 FETUBQ9UGM5 382 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 CSAG2Q9Y5P2 127 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 IGKV3D-11A0A0A0MRZ8 115 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 IGHV3-20A0A0C4DH32 117 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 ANKDD1BA6NHY2 528 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 LRRC14BA6NHZ5 514 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 E2F3O00716 465 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 ERI3O43414 337 aaKnown RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 CDC123O75794 336 aaPredicted RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 SIX3O95343 332 aaPredicted RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 SNRPAP09012 282 aaKnown RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 SBK3P0C264 359 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 H2AFB1P0C5Y9 115 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 H2AFB2P0C5Z0 115 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 GFAPP14136 432 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 TNFRSF8P28908 595 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 ESPL1Q14674 2120 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 ABRAXAS2Q15018 415 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 IGFBP7Q16270 282 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 PFKFB4Q16877 469 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 TSNAXIP1Q2TAA8 658 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 CRB2Q5IJ48 1285 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 GRHL2Q6ISB3 625 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 METTL2BQ6P1Q9 378 aaKnown RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 ABHD17CQ6PCB6 329 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 QSOX2Q6ZRP7 698 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 Q6ZS92 163 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 TEX9Q8N6V9 391 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 OR2L5Q8NG80 312 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 BRIX1Q8TDN6 353 aaKnown RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 PPP4R1Q8TF05 950 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 ZNF473Q8WTR7 871 aaKnown RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 MZB1Q8WU39 189 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 TM9SF4Q92544 642 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 MS4A8Q9BY19 250 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 REXO4Q9GZR2 422 aaKnown RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 LUZP4Q9P127 313 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 CPSF2Q9P2I0 782 aaKnown RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 XPR1Q9UBH6 696 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 C19orf25Q9UFG5 118 aaPredicted RBP10.53□□□□□ -0.72
SMAD4-211ENST00000590499 PLAAQ9Y263 795 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 B3GNT3Q9Y2A9 372 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 TSC22D4Q9Y3Q8 395 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 SVILO95425 2214 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 POLEQ07864 2286 aa10.53□□□□□ -0.72
SMAD4-211ENST00000590499 A0A0G2JN53 185 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 STX16-NPEPL1H3BU86 382 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 STX16O14662 325 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 UGDHO60701 494 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 SEC24DO94855 1032 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 RBP1P09455 135 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 ITGAMP11215 1152 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 RNH1P13489 461 aaKnown RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 JAK1P23458 1154 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 BTN3A2P78410 334 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 MFAP5Q13361 173 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 GTF2H2Q13888 395 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 RUNX2Q13950 521 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 SLC29A2Q14542 456 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 NSDHLQ15738 373 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 PLEKHN1Q494U1 663 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 PRR30Q53SZ7 412 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 COX20Q5RI15 118 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 TEX35Q5T0J7 233 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 MFSD4BQ5TF39 518 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 IRAK1BP1Q5VVH5 260 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 PLAG1Q6DJT9 500 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 GTF2H2CQ6P1K8 395 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 MED27Q6P2C8 311 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 ISLR2Q6UXK2 745 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 GOLGA7Q7Z5G4 137 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 UBE3DQ7Z6J8 389 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 CUZD1Q86UP6 607 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 SCUBE1Q8IWY4 988 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 ZADH2Q8N4Q0 377 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 PTGR2Q8N8N7 351 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 OR7G3Q8NG95 312 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 CCT6BQ92526 530 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 UBE2E3Q969T4 207 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 MTBPQ96DY7 904 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 F2RL3Q96RI0 385 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 LMF1Q96S06 567 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 MRPL57Q9BQC6 102 aaKnown RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 NPLQ9BXD5 320 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 PRDM7Q9NQW5 492 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 TMCO1Q9UM00 188 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 CLDN16Q9Y5I7 305 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 TNPO3Q9Y5L0 923 aaKnown RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 DOPEY2Q9Y3R5 2298 aa10.52□□□□□ -0.73
SMAD4-211ENST00000590499 SETXQ7Z333 2677 aaKnown RBP10.52□□□□□ -0.73
SMAD4-211ENST00000590499 SPTAN1Q13813 2472 aaKnown RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 TCRBV16S1A1N1A0A5B0 115 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms