RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PADI1Q9ULC6 663 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 CDC14AQ9UNH5 594 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 A0A088AWK7 358 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 A0A1B0GX78 115 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 TMEM233B4DJY2 109 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 H0Y3Z8 333 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 STMND1H3BQB6 276 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 SLC28A1O00337 649 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 CASQ2O14958 399 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-206ENST00000565990 CRCPO75575 148 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 CHEK2O96017 543 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 KLK3P07288 261 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-206ENST00000565990 CCNYL3P0C7X3 344 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 ZNF888P0CJ79 500 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-206ENST00000565990 BSGP35613 385 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 HTR6P50406 440 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 DCDP81605 110 aaKnown RBP11.95□□□□□ -0.5
SF3B3-206ENST00000565990 DDX39BQ13838 428 aaKnown RBP11.95□□□□□ -0.5
SF3B3-206ENST00000565990 TBC1D25Q3MII6 688 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 OR4C11Q6IEV9 310 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 LCN10Q6JVE6 187 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 ZFP1Q6P2D0 407 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 C16orf89Q6UX73 402 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 PRSS41Q7RTY9 318 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 ZFAND4Q86XD8 727 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 DTWD1Q8N5C7 304 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 CPSF7Q8N684 471 aaKnown RBP11.95□□□□□ -0.5
SF3B3-206ENST00000565990 AMER3Q8N944 861 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 GALNT6Q8NCL4 622 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 CATSPER1Q8NEC5 780 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 OR9A4Q8NGU2 314 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 TWIST2Q8WVJ9 160 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 FAR2Q96K12 515 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 KCNC2Q96PR1 638 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 BTBD9Q96Q07 612 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 THTPAQ9BU02 230 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 NPLQ9BXD5 320 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-206ENST00000565990 SLC26A1Q9H2B4 701 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 ANKHQ9HCJ1 492 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 ZNF304Q9HCX3 659 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 S100A14Q9HCY8 104 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 IRAK4Q9NWZ3 460 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 AHSPQ9NZD4 102 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 DHCR7Q9UBM7 475 aaKnown RBP11.95□□□□□ -0.5
SF3B3-206ENST00000565990 ADAM29Q9UKF5 820 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 NAALAD2Q9Y3Q0 740 aa11.95□□□□□ -0.5
SF3B3-206ENST00000565990 SCN2AQ99250 2005 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 IGLV3-12A0A075B6K2 115 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 A0A0A6YYC8 382 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 I3L1I5 382 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 PLPP1O14494 284 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 TERTO14746 1132 aaKnown RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 ERI3O43414 337 aaKnown RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 AHCYL1O43865 530 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 DNAJB6O75190 326 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 KLHL18O94889 574 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 ALBP02768 609 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 LINC00032P0C843 101 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 AGXTP21549 392 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 ATP5A1P25705 553 aaKnown RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 AVPR1BP47901 424 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 PLA2G16P53816 162 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 RAB8AP61006 207 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 BTN3A2P78410 334 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 TGM3Q08188 693 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 NKAIN1Q4KMZ8 207 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 DEFB134Q4QY38 66 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 XKR7Q5GH72 579 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 MRPL14Q6P1L8 145 aaKnown RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 GALNT18Q6P9A2 607 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 TRIM40Q6P9F5 258 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 SCIMPQ6UWF3 145 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 OVCH1Q7RTY7 1134 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 NLGN4XQ8N0W4 816 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 ZCCHC7Q8N3Z6 543 aaKnown RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 NLGN4YQ8NFZ3 816 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 RP9Q8TA86 221 aaKnown RBP11.94□□□□□ -0.5
SF3B3-206ENST00000565990 FGF11Q92914 225 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 NKD1Q969G9 470 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 SPDL1Q96EA4 605 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 C3orf30Q96M34 536 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 SERINC2Q96SA4 455 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 CENPKQ9BS16 269 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 SLC7A5P2Q9GIP4 190 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 TGIF2Q9GZN2 237 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 ROGDIQ9GZN7 287 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 PFDN4Q9NQP4 134 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 KCMF1Q9P0J7 381 aa11.94□□□□□ -0.5
SF3B3-206ENST00000565990 TEX51A0A1B0GUA7 166 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 VSTM2BA6NLU5 285 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 PIP5K1BO14986 540 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 HDAC3O15379 428 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 RGS14O43566 566 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 RSL1D1O76021 490 aaKnown RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 B3GALT4O96024 378 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 JUNP05412 331 aaKnown RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 FESP07332 822 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 CD63P08962 238 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 RAB40ALP0C0E4 278 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms