RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SLC5A6Q9Y289 635 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 RNF11Q9Y3C5 154 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 ZGRF1Q86YA3 2104 aa17.02■□□□□ 0.31
SHMT2-206ENST00000553529 SVILO95425 2214 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 USP9YO00507 2555 aaPredicted RBP17.01■□□□□ 0.31
SHMT2-206ENST00000553529 A0A1W2PS29 197 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 WIPF3A6NGB9 483 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 SBK3P0C264 359 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 CTAGE8P0CG41 777 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 GFAPP14136 432 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 ATP5A1P25705 553 aaKnown RBP17.01■□□□□ 0.31
SHMT2-206ENST00000553529 MAGEA12P43365 314 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 SERPINB8P50452 374 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 MTTPP55157 894 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 HSF1Q00613 529 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 MED27Q6P2C8 311 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 GALNTL5Q7Z4T8 443 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 RPS19BP1Q86WX3 136 aaKnown RBP17.01■□□□□ 0.31
SHMT2-206ENST00000553529 CTAGE4Q8IX94 777 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 LAS2Q8IYD9 372 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 OR52B6Q8NGF0 335 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 HUS1BQ8NHY5 278 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 PHF21BQ96EK2 531 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 SERINC2Q96SA4 455 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 FUT8Q9BYC5 575 aa17.01■□□□□ 0.31
SHMT2-206ENST00000553529 TMEM200CA6NKL6 621 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 PPP6CO00743 305 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 OR7A17O14581 309 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 KLK8O60259 260 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 ZNF354AO60765 605 aaPredicted RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 ZG16O60844 167 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 TSPAN8P19075 237 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 CASP2P42575 452 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 GPR143P51810 404 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 MLF1P58340 268 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 RPS13P62277 151 aaKnown RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 NAA30Q147X3 362 aaPredicted RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 TBCCQ15814 346 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 C18orf63Q68DL7 685 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 GRHL2Q6ISB3 625 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 PNPLA5Q7Z6Z6 429 aaPredicted RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 RELL1Q8IUW5 271 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 CPSF7Q8N684 471 aaKnown RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 PTGR2Q8N8N7 351 aaPredicted RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 ACOT4Q8N9L9 421 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 TTLQ8NG68 377 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 MTFMTQ96DP5 389 aaKnown RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 SCMH1Q96GD3 660 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 C5orf34Q96MH7 638 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 UTP23Q9BRU9 249 aaKnown RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 CAPS2Q9BXY5 557 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 ZNF717Q9BY31 904 aaPredicted RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 COPS7BQ9H9Q2 264 aaPredicted RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 DMRT3Q9NQL9 472 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 XPR1Q9UBH6 696 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 MTRF1LQ9UGC7 380 aaKnown RBP17■□□□□ 0.31
SHMT2-206ENST00000553529 TEKT2Q9UIF3 430 aa17■□□□□ 0.31
SHMT2-206ENST00000553529 TRIM49D1C9J1S8 452 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 HRKO00198 91 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 PLPP1O14494 284 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 EEDO75530 441 aaKnown RBP16.99■□□□□ 0.31
SHMT2-206ENST00000553529 GBAP04062 536 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 RHOXF2BP0C7M4 288 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 EPB42P16452 691 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 EEF1DP29692 281 aaKnown RBP16.99■□□□□ 0.31
SHMT2-206ENST00000553529 PHBP35232 272 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 HNRNPH2P55795 449 aaKnown RBP16.99■□□□□ 0.31
SHMT2-206ENST00000553529 SKP1P63208 163 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 GTF2H2Q13888 395 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 CPSF6Q16630 551 aaKnown RBP eCLIP16.99■□□□□ 0.31
SHMT2-206ENST00000553529 GTF2H2CQ6P1K8 395 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 GFRALQ6UXV0 394 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 SLC5A8Q8N695 610 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 B3GNT7Q8NFL0 401 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 ANKRD9Q96BM1 317 aaPredicted RBP16.99■□□□□ 0.31
SHMT2-206ENST00000553529 FRMD6Q96NE9 622 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 RHOXF2Q9BQY4 288 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 ZBTB26Q9HCK0 441 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 LRFN1Q9P244 771 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 MMACHCQ9Y4U1 282 aa16.99■□□□□ 0.31
SHMT2-206ENST00000553529 A0A0G2JMM0 328 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 A0A1W2PPB8 328 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 A0A1W2PRS3 328 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 KIR3DP1A8MWS1 328 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 TMPRSS11DO60235 418 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 FGF17O60258 216 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 INHBAP08476 426 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 ALDH18A1P54886 795 aaKnown RBP16.98■□□□□ 0.31
SHMT2-206ENST00000553529 GPR85P60893 370 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 ACAP2Q15057 778 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 MAPKAPK3Q16644 382 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 FAM83EQ2M2I3 478 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 C4orf17Q53FE4 359 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 PAGE2BQ5JRK9 111 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 KHDRBS2Q5VWX1 349 aaKnown RBP16.98■□□□□ 0.31
SHMT2-206ENST00000553529 MDGA2Q7Z553 956 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 RHEBL1Q8TAI7 183 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 PTPMT1Q8WUK0 201 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-206ENST00000553529 ISL2Q96A47 359 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 PPWD1Q96BP3 646 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms