RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PTGER4P35408 488 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ARHGAP25P42331 645 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 PTTG1IPP53801 180 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 GEMP55040 296 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 CSE1LP55060 971 aaKnown RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 IL2P60568 153 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 EEF1A2Q05639 463 aaKnown RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 SEMA3AQ14563 771 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 RBBP7Q16576 425 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 PDCD4Q53EL6 469 aaKnown RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 VWA2Q5GFL6 755 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ANKRD20A2Q5SQ80 823 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ANKRD20A1Q5TYW2 823 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ANKRD20A3Q5VUR7 823 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 KCTD11Q693B1 232 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 AADACL2Q6P093 401 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 GFRALQ6UXV0 394 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 BBS12Q6ZW61 710 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 CCDC50Q8IVM0 306 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 TBC1D21Q8IYX1 336 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 CCDC110Q8TBZ0 833 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 STT3BQ8TCJ2 826 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 DENND1AQ8TEH3 1009 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 COG1Q8WTW3 980 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ZNF480Q8WV37 535 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 TM9SF4Q92544 642 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 N4BP2L2Q92802 583 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 HAS2Q92819 552 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 NACC2Q96BF6 587 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ULK4Q96C45 1275 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 DCUN1D1Q96GG9 259 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 CDKN2AIPNLQ96HQ2 116 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 NPAS2Q99743 824 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 TREX2Q9BQ50 279 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 C17orf62Q9BQA9 187 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 TMEM121Q9BTD3 319 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 HEMGNQ9BXL5 484 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 MAK16Q9BXY0 300 aaKnown RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 HES7Q9BYE0 225 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 IFT22Q9H7X7 185 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ARNT2Q9HBZ2 717 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 CUTCQ9NTM9 273 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 NLE1Q9NVX2 485 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 SMARCAL1Q9NZC9 954 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 H2AFY2Q9P0M6 372 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ABI3Q9P2A4 366 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 RSPH14Q9UHP6 348 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 SH3BGRL2Q9UJC5 107 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 TINAGQ9UJW2 476 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ASF1AQ9Y294 204 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 R3HDM2Q9Y2K5 976 aaKnown RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ZNF835Q9Y2P0 537 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 LUC7L2Q9Y383 392 aaKnown RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 MRPS2Q9Y399 296 aaKnown RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ALG6Q9Y672 507 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 SONP18583 2426 aaKnown RBP4.33□□□□□ -1.72
CKS1B-207ENST00000477676 PRR14LQ5THK1 2151 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
CKS1B-207ENST00000477676 ANK2Q01484 3957 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 IGHV1-45A0A0A0MS14 117 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 TRAV17A0A0B4J275 112 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 CCDC162PA2VCL2 907 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 OR2W5A6NFC9 320 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 IQCF5A8MTL0 148 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 SMTNL1A8MU46 457 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 HACD1B0YJ81 288 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 LIN7AO14910 233 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-207ENST00000477676 KCNN4O15554 427 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 KLHL41O60662 606 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 GPC4O75487 556 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 AP2A2O94973 939 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 METTL18O95568 372 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 AP2A1O95782 977 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 SERPINC1P01008 464 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 CD63P08962 238 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 RALBP11234 206 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 COX6B1P14854 86 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 ITGALP20701 1170 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 CCR7P32248 378 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 PTH2RP49190 550 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 CARSP49589 748 aaKnown RBP4.32□□□□□ -1.72
CKS1B-207ENST00000477676 RAB28P51157 221 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 NR0B1P51843 470 aaKnown RBP4.32□□□□□ -1.72
CKS1B-207ENST00000477676 UBASH3AP57075 661 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 VSX2P58304 361 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-207ENST00000477676 CLRN1P58418 232 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 TFDP2Q14188 446 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 POU6F1Q14863 301 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 KIR2DS3Q14952 304 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 SYT16Q17RD7 645 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 PRTGQ2VWP7 1150 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 GPR33Q49SQ1 333 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 CCDC38Q502W7 563 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 TFDP3Q5H9I0 405 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 WASHC2DQ5SRD0 308 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 FAAH2Q6GMR7 532 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 TMEM207Q6UWW9 146 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 PACS1Q6VY07 963 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 ZNF534Q76KX8 674 aa4.32□□□□□ -1.72
CKS1B-207ENST00000477676 NDUFAF7Q7L592 441 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms