RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 EIF2DP41214 584 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 ALDH3B1P43353 468 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MAGEA11P43364 429 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 LEPRP48357 1165 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 HARS2P49590 506 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 BMXP51813 675 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 NAGLUP54802 743 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PPP2R2BQ00005 443 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MAB21L1Q13394 359 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MAMLD1Q13495 774 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ITGA9Q13797 1035 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FASTKD3Q14CZ7 662 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 MAPK6Q16659 721 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PCGF3Q3KNV8 242 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 BCL7AQ4VC05 210 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 XKR4Q5GH76 650 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PAGE2BQ5JRK9 111 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 CBWD5Q5RIA9 395 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ERMARDQ5T6L9 678 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FAM69AQ5T7M9 428 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 RIPPLY2Q5TAB7 128 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 C6orf163Q5TEZ5 329 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 LCN1P1Q5VSP4 162 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 METTL21CQ5VZV1 264 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ANKRD54Q6NXT1 300 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 DUS1LQ6P1R4 473 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 RAD9BQ6WBX8 426 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 RBMS3Q6XE24 437 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 SCARA5Q6ZMJ2 495 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 RTL4Q6ZR62 310 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 BBS12Q6ZW61 710 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MTSS1LQ765P7 747 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 TRMT10CQ7L0Y3 403 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 BZW1Q7L1Q6 419 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 CHST3Q7LGC8 479 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 BHLHA15Q7RTS1 189 aaPredicted RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 PLPPR4Q7Z2D5 763 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FAM122BQ7Z309 247 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PXKQ7Z7A4 578 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 TRPT1Q86TN4 253 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 BIVMQ86UB2 503 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 NUDT13Q86X67 352 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FAM131BQ86XD5 332 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 TBC1D10CQ8IV04 446 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 DIS3L2Q8IYB7 885 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 ELMOD2Q8IZ81 293 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ADSSL1Q8N142 457 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MINDY2Q8NBR6 621 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 C11orf65Q8NCR3 313 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PPFIBP2Q8ND30 876 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 BHLHE23Q8NDY6 225 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 OR2AK2Q8NG84 335 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 OR52I2Q8NH67 350 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FGFBP3Q8TAT2 258 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 METTL6Q8TCB7 284 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 KCNG4Q8TDN1 519 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PAQR8Q8TEZ7 354 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SETD7Q8WTS6 366 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 CHURC1Q8WUH1 139 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 HEXDCQ8WVB3 486 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FCAMRQ8WWV6 532 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 CNOT9Q92600 299 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 SNAPC3Q92966 411 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ZNF707Q96C28 371 aaPredicted RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 LINGO1Q96FE5 620 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SIPA1Q96FS4 1042 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ANKRD36BP1Q96IX9 119 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SLC41A2Q96JW4 573 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SERAC1Q96JX3 654 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FER1L6-AS2Q96M78 137 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 KCNK16Q96T55 309 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 TBC1D10AQ9BXI6 508 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 HEMGNQ9BXL5 484 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 TDRD1Q9BXT4 1180 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 PARD6GQ9BYG4 376 aaPredicted RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 USP44Q9H0E7 712 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 OR51V1Q9H2C8 321 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MTIF3Q9H2K0 278 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 KCNN2Q9H2S1 579 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 OSGEPL1Q9H4B0 414 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 EXO5Q9H790 373 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SP140LQ9H930 580 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 BRF2Q9HAW0 419 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FGF22Q9HCT0 170 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 TRPC7Q9HCX4 862 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MRPL47Q9HD33 250 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 DMAP1Q9NPF5 467 aaPredicted RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 PFDN4Q9NQP4 134 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 CENPMQ9NSP4 180 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 INTS9Q9NV88 658 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 TBC1D13Q9NVG8 400 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ELOVL2Q9NXB9 296 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 CTSFQ9UBX1 484 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 LIMA1Q9UHB6 759 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 ATP6V1HQ9UI12 483 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 CD207Q9UJ71 328 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 GGA2Q9UJY4 613 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ACSL5Q9ULC5 683 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SAMHD1Q9Y3Z3 626 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 MAD1L1Q9Y6D9 718 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms