RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 C1GALT1Q9NS00 363 aa16.83■□□□□ 0.28
LMNA-208ENST00000448611 PDP2Q9P2J9 529 aa16.83■□□□□ 0.28
LMNA-208ENST00000448611 CPNE7Q9UBL6 633 aa16.83■□□□□ 0.28
LMNA-208ENST00000448611 WNT16Q9UBV4 365 aa16.83■□□□□ 0.28
LMNA-208ENST00000448611 APOBEC3BQ9UH17 382 aaKnown RBP16.83■□□□□ 0.28
LMNA-208ENST00000448611 OR2A25A4D2G3 310 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 ZW10O43264 779 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 TNFSF14O43557 240 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 GCM2O75603 506 aaPredicted RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 DRD2P14416 443 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 UQCRC2P22695 453 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 CASP9P55211 416 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 RPS15AP62244 130 aaKnown RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 TJAP1Q5JTD0 557 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 MRM1Q6IN84 353 aaKnown RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 VN1R4Q7Z5H5 301 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 TRIM73Q86UV7 250 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 MAGEE2Q8TD90 523 aaPredicted RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 EXOSC8Q96B26 276 aaKnown RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 ADI1Q9BV57 179 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 TMEM121BQ9BXQ6 578 aaPredicted RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 ASPSCR1Q9BZE9 553 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 CD320Q9NPF0 282 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 SMPD3Q9NY59 655 aaPredicted RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 ACTR10Q9NZ32 417 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 ASB4Q9Y574 426 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 KIR2DS5A0A0G2JLQ3 304 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 A0A0G2JNG1 304 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 OR6C74A6NCV1 312 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 KIR2DS3K7RE56 304 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 PLOD2O00469 737 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 POLR2CP19387 275 aaPredicted RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 MAGP20916 626 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 ATP5A1P25705 553 aaKnown RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 SOAT1P35610 550 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 CHI3L1P36222 383 aaPredicted RBP16.82■□□□□ 0.28
LMNA-208ENST00000448611 MERTKQ12866 999 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 SLC9A5Q14940 896 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 KIR2DS5Q14953 304 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 TEAD4Q15561 434 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 GCNT6Q5T4J0 391 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 NDUFAF5Q5TEU4 345 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 FBXO42Q6P3S6 717 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 TRIM40Q6P9F5 258 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 TAF8Q7Z7C8 310 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 PARGQ86W56 976 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 RNF130Q86XS8 419 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 ACOT4Q8N9L9 421 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 OR8K5Q8NH50 307 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 FAM174AQ8TBP5 190 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 SLC37A2Q8TED4 501 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 TMEM38AQ9H6F2 299 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 EHD3Q9NZN3 535 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 MUTYHQ9UIF7 546 aa16.82■□□□□ 0.28
LMNA-208ENST00000448611 OR5K4A6NMS3 321 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 KRT75O95678 551 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 TSFMP43897 325 aaKnown RBP16.81■□□□□ 0.28
LMNA-208ENST00000448611 PXNP49023 591 aaPredicted RBP16.81■□□□□ 0.28
LMNA-208ENST00000448611 ALDH3A2P51648 485 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 CLCN2P51788 898 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 IST1P53990 364 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 ARSFP54793 590 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 MANFP55145 182 aaKnown RBP16.81■□□□□ 0.28
LMNA-208ENST00000448611 RBBP4Q09028 425 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 SLAMF1Q13291 335 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 SPIDRQ14159 915 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 SLC36A3Q495N2 470 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 OTUD3Q5T2D3 398 aaPredicted RBP16.81■□□□□ 0.28
LMNA-208ENST00000448611 ZDHHC21Q8IVQ6 265 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 SRFBP1Q8NEF9 429 aaKnown RBP16.81■□□□□ 0.28
LMNA-208ENST00000448611 HSH2DQ96JZ2 352 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 FCRL4Q96PJ5 515 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 RAD21L1Q9H4I0 556 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 IL1RAPQ9NPH3 570 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 ACSS1Q9NUB1 689 aaPredicted RBP16.81■□□□□ 0.28
LMNA-208ENST00000448611 MAP4K5Q9Y4K4 846 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 MAGED1Q9Y5V3 778 aaPredicted RBP16.81■□□□□ 0.28
LMNA-208ENST00000448611 SNX11Q9Y5W9 270 aa16.81■□□□□ 0.28
LMNA-208ENST00000448611 METTL12A8MUP2 240 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 CTSEP14091 401 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 STXBP1P61764 594 aaKnown RBP16.8■□□□□ 0.28
LMNA-208ENST00000448611 EEF1A2Q05639 463 aaKnown RBP16.8■□□□□ 0.28
LMNA-208ENST00000448611 DAG1Q14118 895 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 VTCN1Q7Z7D3 282 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 ZDHHC13Q8IUH4 622 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 SVOPLQ8N434 492 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 OR10G6Q8NH81 332 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 NT5CQ8TCD5 201 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 ZBED6CLQ96FA7 236 aaPredicted RBP16.8■□□□□ 0.28
LMNA-208ENST00000448611 SHDQ96IW2 340 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 FAIM2Q9BWQ8 316 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 NLNQ9BYT8 704 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 ZNF696Q9H7X3 374 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 NEUROD4Q9HD90 331 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 SIRT3Q9NTG7 399 aaPredicted RBP16.8■□□□□ 0.28
LMNA-208ENST00000448611 FBXL21Q9UKT6 434 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 ARHGEF17Q96PE2 2063 aaPredicted RBP16.8■□□□□ 0.28
LMNA-208ENST00000448611 GSAPA4D1B5 854 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 FAM221BA6H8Z2 402 aa16.8■□□□□ 0.28
LMNA-208ENST00000448611 TMEM229AB2RXF0 380 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms