RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TRPC4Q9UBN4 977 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 GPR45Q9Y5Y3 372 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 B3GALT1Q9Y5Z6 326 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 ASXL3Q9C0F0 2248 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 CEP250Q9BV73 2442 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 A0A1W2PNU3 283 aaPredicted RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 A0A1W2PR48 441 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 GLOD5A6NK44 160 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 H0YIG0 161 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 SCAMP2O15127 329 aaKnown RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 CHST10O43529 356 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRKRAO75569 313 aaKnown RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 SLC22A3O75751 556 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 STK17BO94768 372 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 AIFM1O95831 613 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 SMIM10L1P0DMW3 83 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 COX7A2P14406 83 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZNF28P17035 718 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRPS1L1P21108 318 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 CPN2P22792 545 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 JAK1P23458 1154 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 PIK3R1P27986 724 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 RBMS1P29558 406 aaKnown RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 TLX1P31314 330 aaPredicted RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 RPL3P39023 403 aaKnown RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 XCR1P46094 333 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 GSTM5P46439 218 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 GCGRP47871 477 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 LIM2P55344 173 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 CLDN8P56748 225 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 RAB38P57729 211 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 KCNK10P57789 538 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 UFM1P61960 85 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 TRA2BP62995 288 aaKnown RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 C2orf80Q0P641 193 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ABHD18Q0P651 414 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 FOXC1Q12948 553 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 RUNX2Q13950 521 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 HEPACAMQ14CZ8 416 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 TERF2Q15554 542 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 SYT16Q17RD7 645 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 NKAIN1Q4KMZ8 207 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 TIGD2Q4W5G0 525 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 AGKQ53H12 422 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 MFSD4BQ5TF39 518 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ANKRD26P1Q6NSI1 321 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 PAOXQ6QHF9 649 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 TMPRSS7Q7RTY8 843 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 CLNKQ7Z7G1 428 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 DSELQ8IZU8 1212 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 MMP21Q8N119 569 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 CACTIN-AS1Q8N1I8 211 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 CA13Q8N1Q1 262 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 KRTCAP2Q8N6L1 136 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 MR1Q95460 341 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 PPCDCQ96CD2 204 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 SMIM10Q96HG1 83 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 EGLN2Q96KS0 407 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 GBP5Q96PP8 586 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 CSF3RQ99062 836 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 MAPKAP1Q9BPZ7 522 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZPBPQ9BS86 351 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 NPLQ9BXD5 320 aaPredicted RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ACTL8Q9H568 366 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZNF385DQ9H6B1 395 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 POLR1BQ9H9Y6 1135 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZNF304Q9HCX3 659 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 MS4A12Q9NXJ0 267 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZIM2Q9NZV7 527 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 FOXJ2Q9P0K8 574 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 DAPP1Q9UN19 280 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 WBP11Q9Y2W2 641 aaKnown RBP7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ATG4BQ9Y4P1 393 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 ASB4Q9Y574 426 aa7.48□□□□□ -1.21
HMGA1P4-201ENST00000428643 RP1P56715 2156 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM234BA2RU67 622 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 C9orf172C9J069 976 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 C9J4A7 227 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 MEN1O00255 615 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 ANKRD28O15084 1053 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 SLC22A2O15244 555 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRMT3O60678 531 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 B4GALT2O60909 372 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 DNAJB6O75190 326 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 CDC123O75794 336 aaPredicted RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 KLK3P07288 261 aaPredicted RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PIM1P11309 404 aaPredicted RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 DRD2P14416 443 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PCSK2P16519 638 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 DDX5P17844 614 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 ITGAXP20702 1163 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 DDCP20711 480 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 AGXTP21549 392 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 GPX3P22352 226 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 S100A3P33764 101 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 RORAP35398 523 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 POLR2JP52435 117 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 DCDP81605 110 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 MC1RQ01726 317 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms