RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZNF7P17097 686 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF8P17098 575 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TGM2P21980 687 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ACHEP22303 614 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PRKCHP24723 683 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PPP2R1BP30154 601 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CRHR1P34998 444 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 GJA4P35212 333 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 HSPA9P38646 679 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 HTR6P50406 440 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MAPK12P53778 367 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CDH15P55291 814 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SESN2P58004 480 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PSPHP78330 225 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TLE1Q04724 770 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CHRNB3Q05901 458 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SIGLEC14Q08ET2 396 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ILF3Q12906 894 aaKnown RBP eCLIP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 BAMBIQ13145 260 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ITGADQ13349 1161 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PDE7AQ13946 482 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CSHL1Q14406 222 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 GRM7Q14831 915 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TPD52L1Q16890 204 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 IMPG1Q17R60 797 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 KIZQ2M2Z5 673 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ASTE1Q2TB18 679 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 DEFB115Q30KQ5 88 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ANKRD55Q3KP44 614 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 UGT3A2Q3SY77 523 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 XKR6Q5GH73 641 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 EARS2Q5JPH6 523 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 HACD4Q5VWC8 232 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 KHDRBS2Q5VWX1 349 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SLX4IPQ5VYV7 408 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 KIAA0930Q6ICG6 404 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 FBXO42Q6P3S6 717 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TEPPQ6URK8 271 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 VSTM1Q6UX27 236 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CD300LGQ6UXG3 332 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CERS6Q6ZMG9 384 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SLC46A3Q7Z3Q1 461 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SNX20Q7Z614 316 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MYPOPQ86VE0 399 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CATSPERDQ86XM0 798 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PHF13Q86YI8 300 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 IFT20Q8IY31 132 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SLC35F3Q8IY50 421 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MICU2Q8IYU8 434 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 RBFAQ8N0V3 343 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 LGI4Q8N135 537 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 STK40Q8N2I9 435 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PQLC3Q8N755 202 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SYT14Q8NB59 555 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CYB561A3Q8NBI2 242 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 COLGALT1Q8NBJ5 622 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TXNDC5Q8NBS9 432 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 FBXL13Q8NEE6 735 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 FAM71CQ8NEG0 241 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 FAM83FQ8NEG4 500 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 DNAAF1Q8NEP3 725 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 OR4C5Q8NGB2 326 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 OR10A7Q8NGE5 316 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 OR5M8Q8NGP6 311 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 NANPQ8TBE9 248 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 FAM172AQ8WUF8 416 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 C22orf15Q8WYQ4 148 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MAFIPQ8WZ33 124 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 HSD17B8Q92506 261 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MAP4K1Q92918 833 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TMBIM1Q969X1 311 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CCDC124Q96CT7 223 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 THOC3Q96J01 351 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 RILPQ96NA2 401 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 WDFY2Q96P53 400 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 XPO6Q96QU8 1125 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 C12orf57Q99622 126 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 P2RY13Q9BPV8 354 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 C7orf50Q9BRJ6 194 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 FICDQ9BVA6 458 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 FNDC11Q9BVV2 318 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TIPINQ9BVW5 301 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 JAM3Q9BX67 310 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 HINT2Q9BX68 163 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TM6SF2Q9BZW4 377 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MAGT1Q9H0U3 335 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SLITRK2Q9H156 845 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PCDHAC1Q9H158 963 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 POLR3FQ9H1D9 316 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TTYH1Q9H313 450 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 DPEP2Q9H4A9 486 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ACTR5Q9H9F9 607 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF160Q9HCG1 818 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 TIGARQ9NQ88 270 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PDGFCQ9NRA1 345 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 DUSP22Q9NRW4 184 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 DPP3Q9NY33 737 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 CLDND1Q9NY35 253 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ADA2Q9NZK5 511 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 OR6C3Q9NZP0 311 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms