RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 C8GP07360 202 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 CCL3P10147 92 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 EPXP11678 715 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 WNT3P56703 355 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 THOC5Q13769 683 aaKnown RBP15.42■□□□□ 0.06
CHMP3-203ENST00000409225 BMPR2Q13873 1038 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 PHKG1Q16816 387 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 KCTD19Q17RG1 926 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-203ENST00000409225 CASC4Q6P4E1 433 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 PALM2Q8IXS6 379 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 ULK2Q8IYT8 1036 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 TNIP2Q8NFZ5 429 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 HES6Q96HZ4 224 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 OR4K3Q96R72 315 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 PRTFDC1Q9NRG1 225 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 CLCA1A8K7I4 914 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 EIF3FO00303 357 aaPredicted RBP15.41■□□□□ 0.06
CHMP3-203ENST00000409225 SMIM10L1P0DMW3 83 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 AHRP35869 848 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 SLC1A2P43004 574 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 HNRNPFP52597 415 aaKnown RBP15.41■□□□□ 0.06
CHMP3-203ENST00000409225 HK2P52789 917 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 BTN3A2P78410 334 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 DHX9Q08211 1270 aaKnown RBP15.41■□□□□ 0.06
CHMP3-203ENST00000409225 SLC13A2Q13183 592 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 SP140Q13342 867 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 DHX34Q14147 1143 aaKnown RBP15.41■□□□□ 0.06
CHMP3-203ENST00000409225 CSHL1Q14406 222 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 POU4F3Q15319 338 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 HYAL4Q2M3T9 481 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 FBXL19-AS1Q494R0 122 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 TOR1AIP1Q5JTV8 583 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 HSDL2Q6YN16 418 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 CLNKQ7Z7G1 428 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 KIAA1328Q86T90 577 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 CIARTQ8N365 385 aaPredicted RBP15.41■□□□□ 0.06
CHMP3-203ENST00000409225 ANKRD53Q8N9V6 530 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 TMEM52Q8NDY8 209 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 KIAA1191Q96A73 305 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 ZNF669Q96BR6 464 aaPredicted RBP15.41■□□□□ 0.06
CHMP3-203ENST00000409225 SMIM10Q96HG1 83 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 COX4I2Q96KJ9 171 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 YIPF4Q9BSR8 244 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 TSGA10Q9BZW7 698 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 ADAP2Q9NPF8 381 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 TRMT6Q9UJA5 497 aaKnown RBP15.41■□□□□ 0.06
CHMP3-203ENST00000409225 FOXD3Q9UJU5 478 aaPredicted RBP15.41■□□□□ 0.06
CHMP3-203ENST00000409225 CLDN16Q9Y5I7 305 aa15.41■□□□□ 0.06
CHMP3-203ENST00000409225 A0A0G2JN53 185 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 MYOCOSA0A1B0GUC4 107 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 KDM4EB2RXH2 506 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-203ENST00000409225 H7C1Q1 480 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 SMAD7O15105 426 aaKnown RBP15.4■□□□□ 0.06
CHMP3-203ENST00000409225 NRDCO43847 1150 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 IFNA16P05015 189 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 PIGAP37287 484 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 CCZ1BP86790 482 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 CCZ1P86791 482 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-203ENST00000409225 REEP5Q00765 189 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 RUNX2Q13950 521 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 Q5PR19 223 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 DUPD1Q68J44 220 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 LRRC8EQ6NSJ5 796 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 RAD9BQ6WBX8 426 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 MYO1HQ8N1T3 1032 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 TMEM132CQ8N3T6 1108 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 FBXW8Q8N3Y1 598 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 FAM47BQ8NA70 645 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 GOLM1Q8NBJ4 401 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 RNF214Q8ND24 703 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 TRPV3Q8NET8 790 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 SLC5A11Q8WWX8 675 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 NEIL2Q969S2 332 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 TSNARE1Q96NA8 513 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 AICDAQ9GZX7 198 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 SLC6A15Q9H2J7 730 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 ATG4BQ9Y4P1 393 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 COMMD10Q9Y6G5 202 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 CLCA3PQ9Y6N3 262 aa15.4■□□□□ 0.06
CHMP3-203ENST00000409225 COL6A5A8TX70 2615 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 ARHGEF9O43307 516 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 ZNF354AO60765 605 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-203ENST00000409225 HAUS5O94927 633 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 HIST1H2AGP0C0S8 130 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-203ENST00000409225 TPSB2P20231 275 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 HIST1H2ADP20671 130 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 SAT1P21673 171 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 TRPC1P48995 793 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 RGS4P49798 205 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 HSD17B7P56937 341 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 RBBP5Q15291 538 aaKnown RBP15.39■□□□□ 0.05
CHMP3-203ENST00000409225 TPSAB1Q15661 275 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 ELAVL1Q15717 326 aaKnown RBP15.39■□□□□ 0.05
CHMP3-203ENST00000409225 C4orf22Q6V702 233 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 GSTA5Q7RTV2 222 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 MAATS1Q7Z4T9 603 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 CXorf67Q86X51 503 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-203ENST00000409225 KIF18BQ86Y91 864 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 P3H2Q8IVL5 708 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 ZNF321PQ8N8H1 164 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms