RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 UQCRHP07919 91 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 ZNF10P21506 573 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 ATP5A1P25705 553 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 SERPINB1P30740 379 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 HPDP32754 393 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 SERPINB8P50452 374 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 ALDH18A1P54886 795 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 TAS2R50P59544 299 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 IGLV3-21P80748 117 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 FAM83EQ2M2I3 478 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 SPINK14Q6IE38 97 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 MED27Q6P2C8 311 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 MAMDC2Q7Z304 686 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 CHERPQ8IWX8 916 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 RNF175Q8N4F7 328 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 MAGEB10Q96LZ2 347 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 KCNC2Q96PR1 638 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 MAPKAP1Q9BPZ7 522 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 TBCDQ9BTW9 1192 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 ADAP2Q9NPF8 381 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 ZNF358Q9NW07 568 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 ANKRD10Q9NXR5 420 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 CREBBPQ92793 2442 aa16.78■□□□□ 0.28
TRAPPC3-202ENST00000373162 A1L4Q6 167 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 SYCE1LA8MT33 242 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 A8MUA0 341 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 RTCAO00442 366 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 LRRTM2O43300 516 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 CTNSO60931 367 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 SP1P08047 785 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 HIST1H1TP22492 207 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 PHBP35232 272 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 TMEM35AQ53FP2 167 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 GLE1Q53GS7 698 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 DEPDC1Q5TB30 811 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 KHDRBS2Q5VWX1 349 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 METTL2BQ6P1Q9 378 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 CYP4X1Q8N118 509 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 ACOT4Q8N9L9 421 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 L3MBTL4Q8NA19 623 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 ARMC2Q8NEN0 867 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 SUN3Q8TAQ9 357 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 DCAKDQ8WVC6 231 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 UBE2E3Q969T4 207 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 MRRFQ96E11 262 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 FMO2Q99518 471 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 DMRT3Q9NQL9 472 aa16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 MTRF1LQ9UGC7 380 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-202ENST00000373162 NCOA6Q14686 2063 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 SYNDIG1LA6NDD5 238 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 H0YIV9 168 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 NME2P1O60361 137 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 UGDHO60701 494 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 MYO1DO94832 1006 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 SBK3P0C264 359 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 EPB42P16452 691 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 NME2P22392 152 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 PIK3CBP42338 1070 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 HLCSP50747 726 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 ARFIP1P53367 373 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 ELAVL1Q15717 326 aaKnown RBP16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 HIST2H2ACQ16777 129 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 PFKFB4Q16877 469 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 LIPJQ5W064 366 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 HIST2H2AA3Q6FI13 130 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 SLC25A25Q6KCM7 469 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 CEP128Q6ZU80 1094 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 TMEM151AQ8N4L1 468 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 TEX9Q8N6V9 391 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 SRFBP1Q8NEF9 429 aaKnown RBP16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 HUS1BQ8NHY5 278 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 WDR20Q8TBZ3 569 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 THAP3Q8WTV1 239 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 PTPMT1Q8WUK0 201 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 ANKRD9Q96BM1 317 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 VMP1Q96GC9 406 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 PAFAH2Q99487 392 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 ROGDIQ9GZN7 287 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 TSPYL1Q9H0U9 437 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 LRFN1Q9P244 771 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 VTI1BQ9UEU0 232 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZNF180Q9UJW8 692 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 PPT2Q9UMR5 302 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZNF835Q9Y2P0 537 aa16.76■□□□□ 0.27
TRAPPC3-202ENST00000373162 TRBV11-1A0A0K0K1C0 115 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 CLDN4O14493 209 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 PLPP1O14494 284 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 UNC5CO95185 931 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 SIX3O95343 332 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 ACSL3O95573 720 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 TGFB1P01137 390 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 MYBL2P10244 700 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 GCAP28676 217 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 TYK2P29597 1187 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 CLCN2P51788 898 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZRSR2Q15696 482 aaKnown RBP16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 RNFT1Q5M7Z0 435 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 MRM1Q6IN84 353 aaKnown RBP16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 GALNTL5Q7Z4T8 443 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 GOLGA7Q7Z5G4 137 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms