RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 FAM71E1Q6IPT2 247 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 VN1R5Q7Z5H4 357 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 CACUL1Q86Y37 369 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 DNAJC22Q8N4W6 341 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 Q8N9G6 341 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 OR5AR1Q8NGP9 310 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 EFCAB11Q9BUY7 163 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 SGPP1Q9BX95 441 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 ITPAQ9BY32 194 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 ZNF226Q9NYT6 803 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 TAS2R9Q9NYW1 312 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 ZNF229Q9UJW7 825 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 ASF1AQ9Y294 204 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 PCDHGA2Q9Y5H1 932 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 TCF20Q9UGU0 1960 aaKnown RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 LZTS3O60299 673 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 CISD3P0C7P0 127 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 C6P13671 934 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 GRK5P34947 590 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 PNLIPRP1P54315 467 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 EPHA5P54756 1037 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 EEF1A2Q05639 463 aaKnown RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 DUSP7Q16829 419 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 TIGD6Q17RP2 521 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 MICAQ29983 383 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 ATAD3BQ5T9A4 648 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 HIST2H2AA3Q6FI13 130 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 TNFAIP8L2Q6P589 184 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 LAS2Q8IYD9 372 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 RHOXF1Q8NHV9 184 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 NUS1Q96E22 293 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 ROGDIQ9GZN7 287 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 DCSTAMPQ9H295 470 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 MIEF1Q9NQG6 463 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 CCDC177Q9NQR7 707 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 NUMA1Q14980 2115 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 LRRK1Q38SD2 2015 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 LOC100506127A0A0U1RQW1 187 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 FAM47E-STBD1D6RA91 191 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 FOXE1O00358 373 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 AIREO43918 545 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 TIMP1P01033 207 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 HSMCR30P0CW71 290 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 S100A1P23297 94 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 POU1F1P28069 291 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 SERPINB10P48595 397 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 ALDH9A1P49189 494 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 NKX2-5P52952 324 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 IFITM2Q01629 132 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 E2F2Q14209 437 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 TRIM40Q6P9F5 258 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 ARMC8Q8IUR7 673 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 LRRC56Q8IYG6 542 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 GPR65Q8IYL9 337 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 GOT1L1Q8NHS2 421 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 PSMA8Q8TAA3 256 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 POF1BQ8WVV4 589 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 SLC38A4Q969I6 547 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 RSPRY1Q96DX4 576 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 DSN1Q9H410 356 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 ACER3Q9NUN7 267 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 TAAR2Q9P1P5 351 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 LTBP2Q14767 1821 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 TRBC2A0A5B9 178 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 OTOL1A6NHN0 477 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 CLCA1A8K7I4 914 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 DPM1O60762 260 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 DBTP11182 482 aaKnown RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 ADH5P11766 374 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 ELP6Q0PNE2 266 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 CDC20Q12834 499 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 PDE7AQ13946 482 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 FNDC3BQ53EP0 1204 aaKnown RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 TMIGD1Q6UXZ0 262 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 IQCF2Q8IXL9 164 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 METTL4Q8N3J2 472 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 PLA2G15Q8NCC3 412 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 MCFD2Q8NI22 146 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 HTRA1Q92743 480 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 PAWRQ96IZ0 340 aaKnown RBP12.31□□□□□ -0.44
HIF3A-204ENST00000300862 FAM129BQ96TA1 746 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 ZDHHC5Q9C0B5 715 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 CXorf36Q9H7Y0 433 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 SLAMF7Q9NQ25 335 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 TM7SF3Q9NS93 570 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 NOX1Q9Y5S8 564 aa12.31□□□□□ -0.44
HIF3A-204ENST00000300862 PTHP01270 115 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 ADRA2AP08913 450 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 SERPINB1P30740 379 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 FCHO2Q0JRZ9 810 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 LRRC74AQ0VAA2 488 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 LEXMQ3ZCV2 418 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 THOC7Q6I9Y2 204 aaKnown RBP12.3□□□□□ -0.44
HIF3A-204ENST00000300862 ZNF605Q86T29 641 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 NRSN1Q8IZ57 195 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms