RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 PRDX1Q06830 199 aaKnown RBP16.07■□□□□ 0.16
GAPDH-201ENST00000229239 SFSWAPQ12872 951 aaKnown RBP16.07■□□□□ 0.16
GAPDH-201ENST00000229239 TMEM35AQ53FP2 167 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 C2orf73Q8N5S3 287 aaPredicted RBP16.07■□□□□ 0.16
GAPDH-201ENST00000229239 TBC1D19Q8N5T2 526 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 ANKRD53Q8N9V6 530 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 OR13F1Q8NGS4 319 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 TM4SF18Q96CE8 201 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 CAMK1GQ96NX5 476 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 INSM2Q96T92 566 aaPredicted RBP16.07■□□□□ 0.16
GAPDH-201ENST00000229239 TRPM6Q9BX84 2022 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 EPS8L2Q9H6S3 715 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 RUBCNLQ9H714 662 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 CUEDC1Q9NWM3 386 aaPredicted RBP16.07■□□□□ 0.16
GAPDH-201ENST00000229239 TAAR2Q9P1P5 351 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 WNT16Q9UBV4 365 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 TPRKBQ9Y3C4 175 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 NAALAD2Q9Y3Q0 740 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 HEBP2Q9Y5Z4 205 aa16.07■□□□□ 0.16
GAPDH-201ENST00000229239 A0A1W2PQU0 124 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 TRIM64BA6NI03 449 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 GCM2O75603 506 aaPredicted RBP16.06■□□□□ 0.16
GAPDH-201ENST00000229239 SEC14L2O76054 403 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 CEACAM5P06731 702 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 HOXC4P09017 264 aaPredicted RBP16.06■□□□□ 0.16
GAPDH-201ENST00000229239 PKLRP30613 574 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 TIE1P35590 1138 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 YAP1P46937 504 aaKnown RBP16.06■□□□□ 0.16
GAPDH-201ENST00000229239 CDK6Q00534 326 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 PPP1R8Q12972 351 aaKnown RBP16.06■□□□□ 0.16
GAPDH-201ENST00000229239 COX20Q5RI15 118 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 IER5LQ5T953 404 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 DHRS4L2Q6PKH6 230 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 GANCQ8TET4 914 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 MAL2Q969L2 176 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 ERLEC1Q96DZ1 483 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 SCARF2Q96GP6 870 aaPredicted RBP16.06■□□□□ 0.16
GAPDH-201ENST00000229239 CCNB1IP1Q9NPC3 277 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 KRT84Q9NSB2 600 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 ZSCAN32Q9NX65 697 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 PCDHGB1Q9Y5G3 927 aa16.06■□□□□ 0.16
GAPDH-201ENST00000229239 CFAP20Q9Y6A4 193 aaKnown RBP16.06■□□□□ 0.16
GAPDH-201ENST00000229239 TRBC2A0A5B9 178 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 TMEM229AB2RXF0 380 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 CACNB4O00305 520 aaPredicted RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 NDUFS4O43181 175 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 RNGTTO60942 597 aaKnown RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 GRK3P35626 688 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 FRKP42685 505 aaPredicted RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 CSNK1G2P78368 415 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 MLC1Q15049 377 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 MEP1AQ16819 746 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 SLC5A12Q1EHB4 618 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 KIAA1614Q5VZ46 1190 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 ANKRD34AQ69YU3 496 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 ZNF852Q6ZMS4 543 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 GALNT10Q86SR1 603 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 CACUL1Q86Y37 369 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 ARMC8Q8IUR7 673 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 ATG16L2Q8NAA4 619 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 LINC01555Q8NAE3 123 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 C12orf43Q96C57 262 aaKnown RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 F2RL3Q96RI0 385 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 SLC2A4RGQ9NR83 387 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 SCN3BQ9NY72 215 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 TAS2R7Q9NYW3 318 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 ENOPH1Q9UHY7 261 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 WDR37Q9Y2I8 494 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 NUP214P35658 2090 aaPredicted RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 H7BY64 318 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 SLC1A7O00341 560 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 PDPK1O15530 556 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 DRD2P14416 443 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 IL7RP16871 459 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 JUNDP17535 347 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 PCSK6P29122 969 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 SOAT1P35610 550 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 PCBP3P57721 371 aaKnown RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 CDK5R2Q13319 367 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 MLF2Q15773 248 aaPredicted RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 CTU2Q2VPK5 515 aaKnown RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 RNF130Q86XS8 419 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 SIX5Q8N196 739 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 TTC29Q8NA56 475 aaPredicted RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 OR14C36Q8NHC7 312 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 RAB2BQ8WUD1 216 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 GEMIN6Q8WXD5 167 aaKnown RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 NEURL3Q96EH8 262 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 PRAP1Q96NZ9 151 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 PITX2Q99697 317 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 BCL7BQ9BQE9 202 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 APOOQ9BUR5 198 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 OSGEPL1Q9H4B0 414 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 DDX31Q9H8H2 851 aaKnown RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 ACSS1Q9NUB1 689 aaPredicted RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 EHD3Q9NZN3 535 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 NDRG4Q9ULP0 352 aaKnown RBP16.05■□□□□ 0.16
GAPDH-201ENST00000229239 GMPPBQ9Y5P6 360 aa16.05■□□□□ 0.16
GAPDH-201ENST00000229239 GUCY1B2O75343 617 aa16.04■□□□□ 0.16
GAPDH-201ENST00000229239 ANXA8P13928 327 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms