RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PTGER1P34995 402 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 RPL3P39023 403 aaKnown RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 CCT8P50990 548 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 MANFP55145 182 aaKnown RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 NKG7Q16617 165 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TOR1AIP1Q5JTV8 583 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 GALNT18Q6P9A2 607 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 SPESP1Q6UW49 350 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 Q7L0L9 218 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 LPCAT2Q7L5N7 544 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 SFTPA2Q8IWL1 248 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 SDR16C5Q8N3Y7 309 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ABHD11Q8NFV4 315 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 OR2L3Q8NG85 312 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 C11orf24Q96F05 449 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 BHLHE41Q9C0J9 482 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 KLHL31Q9H511 634 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 GORASP2Q9H8Y8 452 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 MYNNQ9NPC7 610 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ZNF282Q9UDV7 671 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 FBXW2Q9UKT8 454 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 HEMK1Q9Y5R4 338 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 COMMD3-BMI1R4GMX3 469 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 KCNJ13O60928 360 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 ERAL1O75616 437 aaKnown RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 TNFP01375 233 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 OPN1SWP03999 348 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 CELA2BP08218 269 aaPredicted RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 CHRM5P08912 532 aaPredicted RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 PCSK2P16519 638 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 GPC1P35052 558 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 VMACQ2NL98 169 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 KIAA1614Q5VZ46 1190 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 FAM71E1Q6IPT2 247 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 PTCRAQ6ISU1 281 aaPredicted RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 ZC3H7AQ8IWR0 971 aaKnown RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 NAGSQ8N159 534 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 AMER3Q8N944 861 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 GOLM1Q8NBJ4 401 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 OR8K5Q8NH50 307 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 FAM131CQ96AQ9 280 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 PPP1R14BQ96C90 147 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 QRFPRQ96P65 431 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 OSBPL11Q9BXB4 747 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 SLC7A5P2Q9GIP4 190 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 FAM192AQ9GZU8 254 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 ZNF624Q9P2J8 865 aaPredicted RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 BTNL2Q9UIR0 455 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 OR6C74A6NCV1 312 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 PRAMEF26H0Y7S4 382 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 EIF2S1P05198 315 aaKnown RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 FAM58BPP0C7Q3 252 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 SHMT2P34897 504 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 SLC19A1P41440 591 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 TPD52P55327 224 aaPredicted RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 RPS26P62854 115 aaKnown RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 E2F2Q14209 437 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 HEPACAMQ14CZ8 416 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 COX20Q5RI15 118 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 KIAA0895LQ68EN5 471 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 DGLUCYQ7Z3D6 616 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 VTCN1Q7Z7D3 282 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 RNF130Q86XS8 419 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 ZZZ3Q8IYH5 903 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 OFCC1Q8IZS5 231 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 HS3ST5Q8IZT8 346 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 ZCCHC10Q8TBK6 192 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 HLA-CQ95604 372 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 ASPSCR1Q9BZE9 553 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 ARMC7Q9H6L4 198 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 DCAF13Q9NV06 445 aaKnown RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 TEX10Q9NXF1 929 aaPredicted RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 ATP6V1HQ9UI12 483 aa9.47□□□□□ -0.89
VTA1-205ENST00000620996 COLQQ9Y215 455 aaPredicted RBP9.47□□□□□ -0.89
VTA1-205ENST00000620996 RNASET2O00584 256 aaKnown RBP9.46□□□□□ -0.89
VTA1-205ENST00000620996 MAN2B1O00754 1011 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 PDPK1O15530 556 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 TMPRSS11DO60235 418 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 NDUFS2O75306 463 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 KCNK5O95279 499 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 ALPPL2P10696 532 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 MAOBP27338 520 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 PEBP1P30086 187 aaKnown RBP9.46□□□□□ -0.89
VTA1-205ENST00000620996 RPS9P46781 194 aaKnown RBP9.46□□□□□ -0.89
VTA1-205ENST00000620996 LAPTM4AQ15012 233 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 PRSS53Q2L4Q9 553 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 PPP4R4Q6NUP7 873 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 CALHM3Q86XJ0 350 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.46□□□□□ -0.89
VTA1-205ENST00000620996 ADGRF3Q8IZF5 1079 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 UCN3Q969E3 161 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 COQ8BQ96D53 544 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 ZNF597Q96LX8 424 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 RHBGQ9H310 441 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 SELENONQ9NZV5 590 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 TAAR2Q9P1P5 351 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 SAMD4AQ9UPU9 718 aaKnown RBP9.46□□□□□ -0.89
VTA1-205ENST00000620996 TRIM64CA6NLI5 447 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 WASHC1A8K0Z3 465 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 B4DGG1 531 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms