RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 HEPACAMQ14CZ8 416 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 PLCL1Q15111 1095 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 SLC5A12Q1EHB4 618 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 MUM1Q2TAK8 710 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 HKDC1Q2TB90 917 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 HLA-BQ31612 363 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 PRRT3Q5FWE3 981 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 OR4C11Q6IEV9 310 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 OR4F3Q6IEY1 312 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 ERICH5Q6P6B1 374 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 KLHL35Q6PF15 583 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 DBX2Q6ZNG2 339 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 FKBP9P1Q75LS8 142 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 SLCO6A1Q86UG4 719 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 NUDT13Q86X67 352 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 TRIML2Q8N7C3 387 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 FAM156AQ8NDB6 213 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 ADCY4Q8NFM4 1077 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 OR2T12Q8NG77 320 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 GOT1L1Q8NHS2 421 aaPredicted RBP9.91□□□□□ -0.82
LIG3-203ENST00000585370 CREB3L4Q8TEY5 395 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 ADAMTS14Q8WXS8 1223 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 PPCDCQ96CD2 204 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 FAM120BQ96EK7 910 aaKnown RBP9.91□□□□□ -0.82
LIG3-203ENST00000585370 ZNF583Q96ND8 569 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 PANX1Q96RD7 426 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 TBCDQ9BTW9 1192 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 ROGDIQ9GZN7 287 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 RAD21L1Q9H4I0 556 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 GAREM1Q9H706 876 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 DDX31Q9H8H2 851 aaKnown RBP9.91□□□□□ -0.82
LIG3-203ENST00000585370 GORASP2Q9H8Y8 452 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 UCK1Q9HA47 277 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 SH3BP4Q9P0V3 963 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 SPASTQ9UBP0 616 aa9.91□□□□□ -0.82
LIG3-203ENST00000585370 ZNF282Q9UDV7 671 aaPredicted RBP9.91□□□□□ -0.82
LIG3-203ENST00000585370 PNMA8BQ9ULN7 279 aaPredicted RBP9.91□□□□□ -0.82
LIG3-203ENST00000585370 IGKV1-8A0A0C4DH67 115 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 A0A1B0GVT2 93 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 FEZF1A0PJY2 475 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ELOVL7A1L3X0 281 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 LRIT2A6NDA9 550 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 URADA6NGE7 173 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 C2orf74A8MZ97 194 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 FAM220BPB1ANY3 271 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 BTN3A3O00478 584 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 PLPP1O14494 284 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 SCAMP1O15126 338 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ARPC2O15144 300 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ZW10O43264 779 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 LCMT2O60294 686 aaKnown RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 EML2O95834 649 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ABCB1P08183 1280 aaPredicted RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 FURINP09958 794 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 LAMP1P11279 417 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 NME1P15531 152 aaKnown RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 ACADSP16219 412 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 HOXB9P17482 250 aaPredicted RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 GPX2P18283 190 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 GGT1P19440 569 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 TPP2P29144 1249 aaPredicted RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 PTPN6P29350 595 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 PEBP1P30086 187 aaKnown RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 GRIA3P42263 894 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 CSNK1EP49674 416 aaKnown RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 MAPK12P53778 367 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 TAS2R50P59544 299 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 HNRNPKP61978 463 aaKnown RBP eCLIP9.9□□□□□ -0.82
LIG3-203ENST00000585370 RGS1Q08116 209 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ADPRMQ3LIE5 342 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 MANEAQ5SRI9 462 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 GLYATQ6IB77 296 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ADNP2Q6IQ32 1131 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ARMC6Q6NXE6 501 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ZNF621Q6ZSS3 439 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 TMEM26Q6ZUK4 368 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 GLRX5Q86SX6 157 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 SERPINA11Q86U17 422 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 PAQR7Q86WK9 346 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 IFNEQ86WN2 208 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 CALHM3Q86XJ0 350 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 MICU2Q8IYU8 434 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 CDC26Q8NHZ8 85 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 WDR48Q8TAF3 677 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ZDHHC1Q8WTX9 485 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 DNAJC9Q8WXX5 260 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 GFM2Q969S9 779 aaKnown RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 SLC45A3Q96JT2 553 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 NSMCE2Q96MF7 247 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 SLC6A18Q96N87 628 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 F2RL3Q96RI0 385 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 CPPED1Q9BRF8 314 aaPredicted RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 FAIM2Q9BWQ8 316 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 KLHL4Q9C0H6 718 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 KAT8Q9H7Z6 458 aaKnown RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 YY1AP1Q9H869 796 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 SLC6A20Q9NP91 592 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 SPHK1Q9NYA1 384 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms