RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	GBP6	Q6ZN66	633 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	SLC26A9	Q7LBE3	791 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	WFDC8	Q8IUA0	241 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	CREBRF	Q8IUR6	639 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	UMODL1-AS1	Q8N2C9	162 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	TRAM1L1	Q8N609	369 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	RTL3	Q8N8U3	475 aa	Known RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	NOA1	Q8NC60	698 aa	Known RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	MSANTD4	Q8NCY6	345 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	PPHLN1	Q8NEY8	458 aa	Known RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	OR8K1	Q8NGG5	319 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	OR51F2	Q8NH61	342 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	LINC00476	Q8WZB0	136 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	MMAB	Q96EY8	250 aa	Predicted RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	PGM2	Q96G03	612 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	MARS2	Q96GW9	593 aa	Known RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	PTCHD1	Q96NR3	888 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	VPS35	Q96QK1	796 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	NAPG	Q99747	312 aa	Predicted RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	SELENOS	Q9BQE4	189 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	C11orf70	Q9BRQ4	267 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	TUBGCP2	Q9BSJ2	902 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	FUT8	Q9BYC5	575 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	TMPRSS13	Q9BYE2	586 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	LACRT	Q9GZZ8	138 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	SLC39A2	Q9NP94	309 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	EXOC1	Q9NV70	894 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	DNAJC11	Q9NVH1	559 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	DMAC2	Q9NW81	257 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	C1RL	Q9NZP8	487 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	RAB21	Q9UL25	225 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	CAMK2A	Q9UQM7	478 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	ATG4B	Q9Y4P1	393 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	CTAGE9	A4FU28	777 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772		A8MVJ9	347 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772		J3KR12	359 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	EIF3F	O00303	357 aa	Predicted RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	PSMA7	O14818	248 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	FFAR3	O14843	346 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	GPR42	O15529	346 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	TRAF3IP2	O43734	574 aa	Predicted RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	KIF5C	O60282	957 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	POP7	O75817	140 aa	Known RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	SNUPN	O95149	360 aa	Known RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	MYL1	P05976	194 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	CHRM5	P08912	532 aa	Predicted RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	TPM1	P09493	284 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ALOX5	P09917	674 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	RFPL3S	P0C7P2	107 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	BMP4	P12644	408 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	CYP4B1	P13584	511 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	MTIF2	P46199	727 aa	Known RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	RENBP	P51606	427 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	CDH11	P55287	796 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	YWHAE	P62258	255 aa	Known RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	VSNL1	P62760	191 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	PHC1	P78364	1004 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ZBED6	P86452	979 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	BSPH1	Q075Z2	132 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF844	Q08AG5	666 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ZP4	Q12836	540 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	DPYS	Q14117	519 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	FGFBP1	Q14512	234 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	NSDHL	Q15738	373 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	LONRF2	Q1L5Z9	754 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	PRTG	Q2VWP7	1150 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF750	Q32MQ0	723 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ZCWPW2	Q504Y3	356 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	TCTEX1D4	Q5JR98	221 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	WASHC2D	Q5SRD0	308 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	VWA1	Q6PCB0	445 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	TMCO3	Q6UWJ1	677 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	STAC2	Q6ZMT1	411 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	UNC13D	Q70J99	1090 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	SV2B	Q7L1I2	683 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	NDUFAF2	Q8N183	169 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	MUC15	Q8N387	334 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ARHGEF39	Q8N4T4	335 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	OR6P1	Q8NGX9	317 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	SREK1	Q8WXA9	508 aa	Known RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	C22orf15	Q8WYQ4	148 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	TBC1D31	Q96DN5	1066 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	MTBP	Q96DY7	904 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF48	Q96MX3	618 aa	Predicted RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	SNX18	Q96RF0	628 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ERGIC2	Q96RQ1	377 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	KRT12	Q99456	494 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	PKP4	Q99569	1192 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	NRTN	Q99748	197 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	TACO1	Q9BSH4	297 aa	Known RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	CINP	Q9BW66	212 aa	Predicted RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	NGB	Q9NPG2	151 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC52A3	Q9NQ40	469 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	HPF1	Q9NWY4	346 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	PKD2L2	Q9NZM6	624 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	OR6C2	Q9NZP2	312 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	OR12D3	Q9UGF7	316 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.4	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms