RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 PNO1Q9NRX1 252 aaKnown RBP17.66■□□□□ 0.42
SCARF1-204ENST00000570902 PNPLA3Q9NST1 481 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 DEPPQ9NTK1 212 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 DNAJB12Q9NXW2 375 aaKnown RBP17.66■□□□□ 0.42
SCARF1-204ENST00000570902 ZNF223Q9UK11 482 aaPredicted RBP17.66■□□□□ 0.42
SCARF1-204ENST00000570902 DYRK1BQ9Y463 629 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 PHF3Q92576 2039 aaKnown RBP17.65■□□□□ 0.42
SCARF1-204ENST00000570902 ZNF469Q96JG9 3925 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-204ENST00000570902 FAM166BA8MTA8 275 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 CLDN4O14493 209 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 SERPINA6P08185 405 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 ENO2P09104 434 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-204ENST00000570902 HOXB4P17483 251 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-204ENST00000570902 ZFP36L2P47974 494 aaKnown RBP17.65■□□□□ 0.42
SCARF1-204ENST00000570902 CDKN2DP55273 166 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 HSD17B7P56937 341 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 STXBP1P61764 594 aaKnown RBP17.65■□□□□ 0.42
SCARF1-204ENST00000570902 B3GNT6Q6ZMB0 384 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 GK5Q6ZS86 529 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 SCUBE1Q8IWY4 988 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 ANKRD53Q8N9V6 530 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 OR5M9Q8NGP3 310 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 FAR2Q96K12 515 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 SIGLEC10Q96LC7 697 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 SMC6Q96SB8 1091 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 TTYH2Q9BSA4 534 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 TTTY12Q9BZ98 90 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 KLHL31Q9H511 634 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 CCM2LQ9NUG4 571 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-204ENST00000570902 EDARQ9UNE0 448 aa17.65■□□□□ 0.42
SCARF1-204ENST00000570902 NIPBLQ6KC79 2804 aaeCLIP17.64■□□□□ 0.41
SCARF1-204ENST00000570902 FAM155BO75949 473 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 OR2J2O76002 312 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 GPR143P51810 404 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 SLC13A2Q13183 592 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 PDAP1Q13442 181 aaKnown RBP17.64■□□□□ 0.41
SCARF1-204ENST00000570902 RBBP5Q15291 538 aaKnown RBP17.64■□□□□ 0.41
SCARF1-204ENST00000570902 TOR1AIP1Q5JTV8 583 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 ZNF585AQ6P3V2 769 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 NXPE4Q6UWF7 544 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 AGGF1Q8N302 714 aaeCLIP17.64■□□□□ 0.41
SCARF1-204ENST00000570902 PBKQ96KB5 322 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 NPLQ9BXD5 320 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-204ENST00000570902 ADAP2Q9NPF8 381 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 PRTFDC1Q9NRG1 225 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 MYOTQ9UBF9 498 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 MRPS33Q9Y291 106 aaKnown RBP17.64■□□□□ 0.41
SCARF1-204ENST00000570902 L3MBTL1Q9Y468 752 aa17.64■□□□□ 0.41
SCARF1-204ENST00000570902 PINLYPA6NC86 204 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 FAM47E-STBD1D6RA91 191 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 CTAG2O75638 210 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 GLSO94925 669 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-204ENST00000570902 GUCA1CO95843 209 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 IGHG3P01860 377 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 GLI4P10075 376 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 PGAM1P18669 254 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 KLK2P20151 261 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 NR0B1P51843 470 aaKnown RBP17.63■□□□□ 0.41
SCARF1-204ENST00000570902 BTN3A2P78410 334 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 SLC25A35Q3KQZ1 300 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 RBM20Q5T481 1227 aaKnown RBP17.63■□□□□ 0.41
SCARF1-204ENST00000570902 IL20RBQ6UXL0 311 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 TMPRSS11BQ86T26 416 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 THOC6Q86W42 341 aaKnown RBP17.63■□□□□ 0.41
SCARF1-204ENST00000570902 TMEM132CQ8N3T6 1108 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 RASGEF1CQ8N431 466 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 FAM109AQ8N4B1 249 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 GAL3ST3Q96A11 431 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 FAM173AQ9BQD7 235 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 POLDIP3Q9BY77 421 aaKnown RBP17.63■□□□□ 0.41
SCARF1-204ENST00000570902 ST6GALNAC2Q9UJ37 374 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 KCNE2Q9Y6J6 123 aa17.63■□□□□ 0.41
SCARF1-204ENST00000570902 A0A088AWK7 358 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 A0A1B0GVC2 190 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 CTAGE15A4D2H0 777 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 PRKNO60260 465 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-204ENST00000570902 WDR1O75083 606 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 OR6B1O95007 311 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 ZNF10P21506 573 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-204ENST00000570902 GABRB3P28472 473 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 PEX19P40855 299 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 BMPR2Q13873 1038 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 CRYMQ14894 314 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 ELAVL1Q15717 326 aaKnown RBP17.62■□□□□ 0.41
SCARF1-204ENST00000570902 XKR6Q5GH73 641 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 TTC27Q6P3X3 843 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 ARSKQ6UWY0 536 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 HSDL2Q6YN16 418 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 TRILQ7L0X0 811 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 CTAGE6Q86UF2 777 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 ZNF595Q8IYB9 648 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 TTLQ8NG68 377 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 MAGOHBQ96A72 148 aaKnown RBP17.62■□□□□ 0.41
SCARF1-204ENST00000570902 RASL10BQ96S79 203 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 IL1RL2Q9HB29 575 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 FAM215AQ9Y5M1 114 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 CLCA3PQ9Y6N3 262 aa17.62■□□□□ 0.41
SCARF1-204ENST00000570902 A0A0G2JNJ9 132 aa17.61■□□□□ 0.41
SCARF1-204ENST00000570902 TMEM200CA6NKL6 621 aa17.61■□□□□ 0.41
SCARF1-204ENST00000570902 C4orf51C9J302 202 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms