RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PPP1R3CQ9UQK1 317 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 FOXA2Q9Y261 457 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 NUDCQ9Y266 331 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 SH3GLB1Q9Y371 365 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 NPHP3Q7Z494 1330 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 C2orf92A0A1B0GVN3 265 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 MACROD2A1Z1Q3 448 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 MEIOCA2RUB1 952 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 GTPBP10A4D1E9 387 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 C19orf81C9J6K1 198 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ANHXE9PGG2 379 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SLCO1B7G3V0H7 640 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SIGLEC5O15389 551 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SYT7O43581 403 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 HSF2BPO75031 334 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SEC22BO75396 215 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 KHDRBS3O75525 346 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ZFAND5O76080 213 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 AREGP15514 252 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 FERP16591 822 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 AADACP22760 399 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 AHCYP23526 432 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ACKR3P25106 362 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 OR1D2P34982 312 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 PITPNBP48739 271 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 TNFSF10P50591 281 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 CLCN4P51793 760 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 LUMP51884 338 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 CNN1P51911 297 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 HNRNPFP52597 415 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SNRPD1P62314 119 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 TMEM187Q14656 261 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SPHARQ15513 63 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 FAM106AQ4KMX7 169 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 PARP10Q53GL7 1025 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ZC2HC1BQ5TFG8 222 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF776Q68DI1 518 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ZCCHC12Q6PEW1 402 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 WDR88Q6ZMY6 472 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 Q6ZRP5 223 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 C15orf52Q6ZUT6 534 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 Q71RC1 249 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ADAMTSL2Q86TH1 951 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SLC43A2Q8N370 569 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF248Q8NDW4 579 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 OR10G8Q8NGN5 311 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 EXOC6Q8TAG9 804 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ATP8B4Q8TF62 1192 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 GATAD1Q8WUU5 269 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 TAF15Q92804 592 aaKnown RBP eCLIP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 MRPL53Q96EL3 112 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ERGIC2Q96RQ1 377 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 IL12RB2Q99665 862 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF577Q9BSK1 485 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 TDRD1Q9BXT4 1180 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 TEX13AQ9BXU3 409 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 TSPYL1Q9H0U9 437 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 WDR13Q9H1Z4 485 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 DPEP3Q9H4B8 488 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 DCLRE1BQ9H816 532 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SYTL2Q9HCH5 934 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 FGF22Q9HCT0 170 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 PRMT8Q9NR22 394 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SPHK2Q9NRA0 654 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 EXOC1Q9NV70 894 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 HMG20BQ9P0W2 317 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 DBF4Q9UBU7 674 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 CACNG5Q9UF02 275 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 IL19Q9UHD0 177 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 UBQLN2Q9UHD9 624 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 ISY1Q9ULR0 285 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 OR1A2Q9Y585 309 aa2.68□□□□□ -1.98
SCFD1-213ENST00000554776 SPAG9O60271 1321 aaKnown RBP2.68□□□□□ -1.98
SCFD1-213ENST00000554776 BICDL2A1A5D9 508 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 LMO7DNF2Z398 122 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 SLC1A7O00341 560 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 CLN5O75503 358 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF821O75541 412 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-213ENST00000554776 DUS4LO95620 317 aaKnown RBP2.67□□□□□ -1.98
SCFD1-213ENST00000554776 EPOP01588 193 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 IGHEP01854 428 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 VTNP04004 478 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ALPPP05187 535 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ALPPL2P10696 532 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 CEBPBP17676 345 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 RPA1P27694 616 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 FEN1P39748 380 aaKnown RBP2.67□□□□□ -1.98
SCFD1-213ENST00000554776 EVCP57679 992 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 KCNK10P57789 538 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 STARD6P59095 220 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 HERV-K104P63124 156 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 PPP1R8Q12972 351 aaKnown RBP2.67□□□□□ -1.98
SCFD1-213ENST00000554776 GPR50Q13585 617 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 EFTUD2Q15029 972 aaKnown RBP eCLIP2.67□□□□□ -1.98
SCFD1-213ENST00000554776 TEAD2Q15562 447 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 FAM189A2Q15884 450 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 C3AR1Q16581 482 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ZFP69Q49AA0 526 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 EPC2Q52LR7 807 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 SPANXN4Q5MJ08 99 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms