RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 KLF2Q9Y5W3 355 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-224ENST00000545688 FAM169AQ9Y6X4 670 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 ABCC6O95255 1503 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 CPSF1Q10570 1443 aaKnown RBP3.53□□□□□ -1.84
SNHG1-224ENST00000545688 PPIP5K1Q6PFW1 1433 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 NEDD4P46934 1319 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 TRBC2A0A5B9 178 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 TRIM49BA6NDI0 452 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 ARHGEF33A8MVX0 844 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 C17orf105B2RV13 164 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 TADA2AO75478 443 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 CD59P13987 128 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 KLK2P20151 261 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 EEF1B2P24534 225 aaKnown RBP3.53□□□□□ -1.84
SNHG1-224ENST00000545688 GPR183P32249 361 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 SFTPDP35247 375 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 PTGISQ16647 500 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 RNLSQ5VYX0 342 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 KRT39Q6A163 491 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 MZT2BQ6NZ67 158 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 BAIAP2L2Q6UXY1 529 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 TLK2Q86UE8 772 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 CCDC60Q8IWA6 550 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-224ENST00000545688 ZBED8Q8IZ13 594 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 MAML2Q8IZL2 1156 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-224ENST00000545688 C4orf32Q8N8J7 132 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 CSNK1G2-AS1Q8NCQ2 148 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 CNOT6LQ96LI5 555 aaKnown RBP3.53□□□□□ -1.84
SNHG1-224ENST00000545688 SLITRK2Q9H156 845 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 TNFRSF19Q9NS68 423 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 PXDNLA1KZ92 1463 aa3.53□□□□□ -1.84
SNHG1-224ENST00000545688 TOPAZ1Q8N9V7 1692 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 IL16Q14005 1332 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 WNK3Q9BYP7 1800 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 TDRD6O60522 2096 aaKnown RBP3.52□□□□□ -1.85
SNHG1-224ENST00000545688 PDHXO00330 501 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 MAGEB2O15479 319 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 MTRF1O75570 445 aaKnown RBP3.52□□□□□ -1.85
SNHG1-224ENST00000545688 OR52Z1P0C646 297 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 C4BPBP20851 252 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 RBPJQ06330 500 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 SIX1Q15475 284 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-224ENST00000545688 LACTB2Q53H82 288 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-224ENST00000545688 PRSS55Q6UWB4 352 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-224ENST00000545688 CD177Q8N6Q3 437 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 Q8N7P7 452 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 OR9Q2Q8NGE9 314 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 RFT1Q96AA3 541 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 RIMS4Q9H426 269 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-224ENST00000545688 KLK11Q9UBX7 282 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 FBXL4Q9UKA2 621 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 PILRAQ9UKJ1 303 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 POMT2Q9UKY4 750 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 MRPS18CQ9Y3D5 142 aaKnown RBP3.52□□□□□ -1.85
SNHG1-224ENST00000545688 QRICH2Q9H0J4 1663 aa3.52□□□□□ -1.85
SNHG1-224ENST00000545688 ANKRD36BQ8N2N9 1353 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 BTAF1O14981 1849 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 TUBGCP6Q96RT7 1819 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 NFAT5O94916 1531 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 hCG_38984A0A1B0GV85 526 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 IQCMA0A1B0GVH7 501 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 F8VVB4 439 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 F8VWA3 439 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 RNF103O00237 685 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 RTL8CO15255 209 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 ZNF749O43361 778 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 SH3BGRLO75368 114 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 WDHD1O75717 1129 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-224ENST00000545688 LMO2P25791 158 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 DUTP33316 252 aaKnown RBP3.51□□□□□ -1.85
SNHG1-224ENST00000545688 SRPXP78539 464 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 DLK1P80370 383 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 POU5F1Q01860 360 aaKnown RBP3.51□□□□□ -1.85
SNHG1-224ENST00000545688 CACNG1Q06432 222 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 C9orf66Q5T8R8 295 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 AGAP7PQ5VUJ5 663 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 SUSD4Q5VX71 490 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 NAA16Q6N069 864 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-224ENST00000545688 POGLUT1Q8NBL1 392 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 CASP10Q92851 521 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 NXPE2Q96DL1 559 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 PGM2Q96G03 612 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 CYYR1Q96J86 154 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 LRRC3BQ96PB8 259 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 RNF121Q9H920 327 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 IL1RAPQ9NPH3 570 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 ZNF581Q9P0T4 197 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 NSD3Q9BZ95 1437 aa3.51□□□□□ -1.85
SNHG1-224ENST00000545688 PDE4DIPQ5VU43 2346 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 LY75O60449 1722 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 TTC21BQ7Z4L5 1316 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 A8MVM7 634 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 RENP00797 406 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 ADORA3P0DMS8 318 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 NR2F1P10589 423 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 GSK3BP49841 420 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 ABCE1P61221 599 aaKnown RBP3.5□□□□□ -1.85
SNHG1-224ENST00000545688 IFI35P80217 286 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-224ENST00000545688 FHL5Q5TD97 284 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 WDR78Q5VTH9 848 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms