RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 KRT78Q8N1N4 520 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ZFP62Q8NB50 900 aaPredicted RBP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 TMEM52Q8NDY8 209 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 C16orf52Q8NHV5 167 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 PYROXD1Q8WU10 500 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 PHF3Q92576 2039 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 MARVELD3Q96A59 401 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 PTCD3Q96EY7 689 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 TSPAN17Q96FV3 270 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 RBBP8Q99708 897 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 TRIM31Q9BZY9 425 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 CNOT10Q9H9A5 744 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 CAB39LQ9H9S4 337 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 PLSCR2Q9NRY7 297 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 DNAJC11Q9NVH1 559 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ANKRD10Q9NXR5 420 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 PYCARDQ9ULZ3 195 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 DAPP1Q9UN19 280 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 MEMO1Q9Y316 297 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 TSC22D4Q9Y3Q8 395 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ASB1Q9Y576 335 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ADGRG4Q8IZF6 3080 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 OTOGQ6ZRI0 2925 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 TRGV8A0A0C4DH27 118 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 ENO4A6NNW6 628 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 CLDN4O14493 209 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 ERI3O43414 337 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 RAD51CO43502 376 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 CTNSO60931 367 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 STK16O75716 305 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 MLYCDO95822 493 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 SERPIND1P05546 499 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 SLC35E2BP0CK96 405 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 MTHFD2P13995 350 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 SAT1P21673 171 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 GRNP28799 593 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 HPDP32754 393 aaPredicted RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 GP5P40197 560 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 HNF4AP41235 474 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 CLCN2P51788 898 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 HNRNPFP52597 415 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 LIM2P55344 173 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 RAB38P57729 211 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 RAB10P61026 200 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 IGLV3-21P80748 117 aaPredicted RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 ALDH6A1Q02252 535 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 DOC2AQ14183 400 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 EFTUD2Q15029 972 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 C3AR1Q16581 482 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 GRTP1Q5TC63 336 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 ADNP2Q6IQ32 1131 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 ZDHHC24Q6UX98 284 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 MAATS1Q7Z4T9 603 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 DOLPP1Q86YN1 238 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 GPSM1Q86YR5 675 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF595Q8IYB9 648 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 SPATA6LQ8N4H0 392 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 POGLUT1Q8NBL1 392 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 ARMC2Q8NEN0 867 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 OR8K3Q8NH51 312 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 PHF10Q8WUB8 498 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 PTPMT1Q8WUK0 201 aaPredicted RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 UBTD2Q8WUN7 234 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 VMP1Q96GC9 406 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 SERINC2Q96SA4 455 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 DMRTA2Q96SC8 542 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 ATOH8Q96SQ7 321 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 EGFL8Q99944 293 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 TREX2Q9BQ50 279 aaPredicted RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 EFCAB11Q9BUY7 163 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 CD244Q9BZW8 370 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 REXO4Q9GZR2 422 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 LYRM4Q9HD34 91 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 SAYSD1Q9NPB0 183 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 CHST11Q9NPF2 352 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 KLHL1Q9NR64 748 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 VTI1BQ9UEU0 232 aa7.81□□□□□ -1.16
SMARCB1-207ENST00000491967 POLQO75417 2590 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 INTS1Q8N201 2190 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 HCFC1P51610 2035 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 HMX2A2RU54 273 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 ANKDD1BA6NHY2 528 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 PRSS44E7EML9 344 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 NPIPA5E9PKD4 350 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 E9PLN8 166 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 PSMD12O00232 456 aaPredicted RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 FCHO1O14526 889 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 PHGDHO43175 533 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 B3GALT2O43825 422 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 KLK8O60259 260 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 MYO1DO94832 1006 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 UQCRHP07919 91 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 STMN1P16949 149 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 HTR1EP28566 365 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 PPP2R1BP30154 601 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 PTGER4P35408 488 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 HSPA7P48741 367 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 ST13P50502 369 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 ARFIP1P53367 373 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms