RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TSTA3Q13630 321 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 ARHGAP19Q14CB8 494 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 CCSMST1Q4G0I0 132 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 ANKRD20A4Q4UJ75 823 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 SEL1L2Q5TEA6 688 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 MRNIPQ6NTE8 343 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 FBXO42Q6P3S6 717 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 LRRC8BQ6P9F7 803 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 ADCK2Q7Z695 626 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 SDCCAG8Q86SQ7 713 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 CCDC89Q8N998 374 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 LRRC57Q8N9N7 239 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 OR9A1PQ8NGU1 263 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 MCOLN3Q8TDD5 553 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 ATG4AQ8WYN0 398 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 SMPDL3AQ92484 453 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 JADE3Q92613 823 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 HSPBAP1Q96EW2 488 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 MAGED4Q96JG8 741 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 LURAP1Q96LR2 239 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF354BQ96LW1 612 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 PANX2Q96RD6 677 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 MESP1Q9BRJ9 268 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF700Q9H0M5 742 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 P2RY12Q9H244 342 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 POFUT1Q9H488 388 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 STMN3Q9NZ72 180 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 PAK5Q9P286 719 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 MARCH4Q9P2E8 410 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 STOX2Q9P2F5 926 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 C19orf25Q9UFG5 118 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 PACSIN2Q9UNF0 486 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 RUVBL2Q9Y230 463 aaKnown RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 RUVBL1Q9Y265 456 aaKnown RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 CELSR2Q9HCU4 2923 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CROCCQ5TZA2 2017 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 A0A0A6YYC8 382 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 A0A1W2PPV9 198 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 TCRBV7S2A1N4TA0A589 114 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 A8MUI8 341 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 NUDT19A8MXV4 375 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 E5RI56 91 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 I3L1I5 382 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 MYO1CO00159 1063 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 FFAR3O14843 346 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 GPR42O15529 346 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 TTI1O43156 1089 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 LIASO43766 372 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 NRP2O60462 931 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 MATN4O95460 622 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 FTCDO95954 541 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CATP04040 527 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CELA2AP08217 269 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 ITGAMP11215 1152 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 ERGP11308 486 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 EZRP15311 586 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CHRM3P20309 590 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 MST1P26927 711 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 SSTR2P30874 369 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 FMO4P31512 558 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 AVPR1BP47901 424 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 ABATP80404 500 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 ALDH6A1Q02252 535 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 RELAQ04206 551 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 PRDX1Q06830 199 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 FAM53BQ14153 422 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 FASTKQ14296 549 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 PCOLCEQ15113 449 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 OASLQ15646 514 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 HKDC1Q2TB90 917 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 BTBD16Q32M84 506 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 TTLL9Q3SXZ7 439 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 MINDY4Q4G0A6 757 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 KRTCAP3Q53RY4 240 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CT83Q5H943 113 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF766Q5HY98 468 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 MFSD4BQ5TF39 518 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CD276Q5ZPR3 534 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 PLAG1Q6DJT9 500 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 TMEM205Q6UW68 189 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 SUSD1Q6UWL2 747 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 C4orf22Q6V702 233 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 NEK10Q6ZWH5 1172 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CPEB2Q7Z5Q1 589 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 PAQR7Q86WK9 346 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 EID3Q8N140 333 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 HORMAD2Q8N7B1 307 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 AMER3Q8N944 861 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 FAM98AQ8NCA5 519 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 HIPK4Q8NE63 616 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 ACRBPQ8NEB7 543 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 OR2A5Q96R48 311 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 EBNA1BP2Q99848 306 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 FOXB1Q99853 325 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 IL22Q9GZX6 179 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CHRAC1Q9NRG0 131 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 TREX1Q9NSU2 369 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 BFARQ9NZS9 450 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 KLHL14Q9P2G3 628 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 TAC3Q9UHF0 121 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms