RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 HPCAL1P37235 193 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 RPL3P39023 403 aaKnown RBP21.82■■□□□ 1.08
CPSF4-204ENST00000436336 MNAT1P51948 309 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 PDX1P52945 283 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 NHLH1Q02575 133 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 C2orf80Q0P641 193 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 FAM53BQ14153 422 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 TRIP6Q15654 476 aaKnown RBP21.82■■□□□ 1.08
CPSF4-204ENST00000436336 TLDC1Q6P9B6 456 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 B3GNT8Q7Z7M8 397 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 C10orf90Q96M02 699 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 SLC52A3Q9NQ40 469 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 EP300Q09472 2414 aaPredicted RBP21.81■■□□□ 1.08
CPSF4-204ENST00000436336 SCAMP2O15127 329 aaKnown RBP21.81■■□□□ 1.08
CPSF4-204ENST00000436336 B3GALT2O43825 422 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 IL6P05231 212 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 IL1RNP18510 177 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 CCKBRP32239 447 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 CSTF2P33240 577 aaKnown RBP eCLIP21.81■■□□□ 1.08
CPSF4-204ENST00000436336 SKP1P63208 163 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 KLC1Q07866 573 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 HEPACAMQ14CZ8 416 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 MUM1Q2TAK8 710 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 FAM214AQ32MH5 1076 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 MTERF3Q96E29 417 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 REEP4Q9H6H4 257 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 TOR4AQ9NXH8 423 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 SIDT1Q9NXL6 827 aaKnown RBP21.81■■□□□ 1.08
CPSF4-204ENST00000436336 NAALAD2Q9Y3Q0 740 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 ASB4Q9Y574 426 aa21.81■■□□□ 1.08
CPSF4-204ENST00000436336 A0A1W2PP18 115 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 CCDC154A6NI56 674 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 BBIP1A8MTZ0 92 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 CAPN3P20807 821 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 CPA2P48052 419 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 SRSF11Q05519 484 aaKnown RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 UGT8Q16880 541 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 SPRED3Q2MJR0 410 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 FAM174BQ3ZCQ3 159 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 CCDC157Q569K6 752 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 R3HCC1LQ7Z5L2 792 aaKnown RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 PDSS2Q86YH6 399 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 NUDT8Q8WV74 236 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 PRPF18Q99633 342 aaKnown RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 NPLQ9BXD5 320 aaPredicted RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 ATP6V1HQ9UI12 483 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 EXO1Q9UQ84 846 aaKnown RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 NDUFAF1Q9Y375 327 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 FURINP09958 794 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 CDK4P11802 303 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 COX7A2P14406 83 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 HNRNPH2P55795 449 aaKnown RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 INSM1Q01101 510 aaPredicted RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 C16orf72Q14CZ0 275 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 MMEL1Q495T6 779 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 VPS26BQ4G0F5 336 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 SPANXN4Q5MJ08 99 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 YOD1Q5VVQ6 348 aaPredicted RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 CYB5D1Q6P9G0 228 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 PRSS41Q7RTY9 318 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 CAMKMTQ7Z624 323 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 AGBL5Q8NDL9 886 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 OR6C1Q96RD1 312 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 RTKNQ9BST9 563 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 FAIM2Q9BWQ8 316 aa21.8■■□□□ 1.08
CPSF4-204ENST00000436336 TEX10Q9NXF1 929 aaPredicted RBP21.8■■□□□ 1.08
CPSF4-204ENST00000436336 ANGPT2O15123 496 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 CFLARO15519 480 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 MED26O95402 600 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 NSA2O95478 260 aaKnown RBP21.79■■□□□ 1.08
CPSF4-204ENST00000436336 PGRP06401 933 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 DRD2P14416 443 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 GCGRP47871 477 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 RASSF2P50749 326 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 MC1RQ01726 317 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 PDE7AQ13946 482 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 TIGD2Q4W5G0 525 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 COQ5Q5HYK3 327 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 GPR180Q86V85 440 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 DEFB124Q8NES8 71 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 VPS33AQ96AX1 596 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 EFCAB1Q9HAE3 211 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 LYRM4Q9HD34 91 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 CUTCQ9NTM9 273 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 PHF11Q9UIL8 331 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 FBXW2Q9UKT8 454 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 DAPP1Q9UN19 280 aa21.79■■□□□ 1.08
CPSF4-204ENST00000436336 GABRR3A8MPY1 467 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 FBP2O00757 339 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 FOXS1O43638 330 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 DDCP20711 480 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 S100A3P33764 101 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 DGKQP52824 942 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 ARSFP54793 590 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 FOXM1Q08050 763 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 NDUFAF5Q5TEU4 345 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 CDCP2Q5VXM1 449 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 BPHLQ86WA6 291 aaPredicted RBP21.78■■□□□ 1.08
CPSF4-204ENST00000436336 OR7A2PQ8NGA2 310 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 OR8J2Q8NGG1 315 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms