RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CIDECQ96AQ7 238 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 LPIN3Q9BQK8 851 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SYT17Q9BSW7 474 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 MRPL9Q9BYD2 267 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 TMPRSS13Q9BYE2 586 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 IKZF3Q9UKT9 509 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SCML1Q9UN30 329 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SNX8Q9Y5X2 465 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TTC28Q96AY4 2481 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 MYO9AB2RTY4 2548 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 A0A1W2PPL8 197 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 CDC7O00311 574 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 HAPLN1P10915 354 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 GPC1P35052 558 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SELENOWP63302 87 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 P2RY14Q15391 338 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PLK5Q496M5 336 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PLEKHM3Q6ZWE6 761 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TOP6BLQ8N6T0 577 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR52H1Q8NGJ2 320 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 HAVCR2Q8TDQ0 301 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 APOBEC4Q8WW27 367 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 ZBED6CLQ96FA7 236 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR2M2Q96R28 347 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TRIB3Q96RU7 358 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 IFT46Q9NQC8 304 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PRDM5Q9NQX1 630 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 SLCO1C1Q9NYB5 712 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TMCC3Q9ULS5 477 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PTCH2Q9Y6C5 1203 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 DMXL1Q9Y485 3027 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 FABP12A6NFH5 140 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PRAMEF25A6NGN4 478 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SEMA7AO75326 666 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ULK1O75385 1050 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PRPS1L1P21108 318 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 APEX1P27695 318 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 GABRA5P31644 462 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 KCNJ10P78508 379 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 IL1RL1Q01638 556 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 MARC1Q5VT66 337 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 FAM219BQ5XKK7 198 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 CERS6Q6ZMG9 384 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ENKURQ8TC29 256 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 NDRG1Q92597 394 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 FBXW5Q969U6 566 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SMOQ99835 787 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ULBP1Q9BZM6 244 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SLC39A1Q9NY26 324 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 GPR83Q9NYM4 423 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SLC22A23A1A5C7 686 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 GALR3O60755 368 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR2A4O95047 310 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 FGF2P09038 288 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 CXCL3P19876 107 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 CCR1P32246 355 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TTPAP49638 278 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 CLCN7P51798 805 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SP4Q02446 784 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ABRAXAS2Q15018 415 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SIRPB2Q5JXA9 342 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ANKRD54Q6NXT1 300 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 CD300LDQ6UXZ3 194 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TMEM132CQ8N3T6 1108 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR4A15Q8NGL6 344 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR5M9Q8NGP3 310 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SP7Q8TDD2 431 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 UFD1Q92890 307 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SENP5Q96HI0 755 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR2A7Q96R45 310 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 DOHHQ9BU89 302 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ZNF416Q9BWM5 594 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 BEX2Q9BXY8 128 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SLC39A8Q9C0K1 460 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ATXN3LQ9H3M9 355 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TMEM38AQ9H6F2 299 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ACER3Q9NUN7 267 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ZNF226Q9NYT6 803 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 MPP6Q9NZW5 540 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PDP1Q9P0J1 537 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 DLGAP4Q9Y2H0 992 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 STK25O00506 426 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 FABP7O15540 132 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 GJB1P08034 283 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PKMP14618 531 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 ZP3P21754 424 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 IDH2P48735 452 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 POLR2GP62487 172 aaKnown RBP eCLIP4.93□□□□□ -1.62
RIF1-203ENST00000428287 PPP3R1P63098 170 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 GPR162Q16538 588 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 RETSATQ6NUM9 610 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TRIM69Q86WT6 500 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 RGL4Q8IZJ4 473 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TMEM130Q8N3G9 435 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ATPAF2Q8N5M1 289 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TMEM145Q8NBT3 493 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR6B3Q8NGW1 331 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 HERVK_113Q902F9 699 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SECISBP2Q96T21 854 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 FDXACB1Q9BRP7 624 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms