RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TRAV34A0A0B4J273 112 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 IGHV3-16A0A0C4DH30 117 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 C5orf52A6NGY3 159 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 RPL37AP8A6NKH3 93 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 E9PAM4 449 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 ANHXE9PGG2 379 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 H7C0S8 307 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 SELENOFO60613 162 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 PRDM1O75626 825 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 ANGPTL1O95841 491 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 RENP00797 406 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 CALCAP01258 141 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 MT-ND1P03886 318 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 QDPRP09417 244 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 TSPY3P0CV98 308 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 TSPY8P0CW00 308 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 RPL9P32969 192 aaKnown RBP3.17□□□□□ -1.9
PMS1-203ENST00000409593 TSPY1Q01534 308 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 RBBP4Q09028 425 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 MUC21Q5SSG8 566 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 CAVIN1Q6NZI2 390 aaKnown RBP3.17□□□□□ -1.9
PMS1-203ENST00000409593 VITQ6UXI7 678 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 RFPL4BQ6ZWI9 263 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 FGFRL1Q8N441 504 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 BANPQ8N9N5 519 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 CSNK1G2-AS1Q8NCQ2 148 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 BPIFA2Q96DR5 249 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 PINK1Q9BXM7 581 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 POMT1Q9Y6A1 747 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 A0A0B4J203 849 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 CCDC162PA2VCL2 907 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 A8MU10 97 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 TXNL1O43396 289 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 ACSL4O60488 711 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 RLN1P04808 185 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 TIA1P31483 386 aaKnown RBP eCLIP3.17□□□□□ -1.9
PMS1-203ENST00000409593 GP5P40197 560 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 SLC1A4P43007 532 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 OR3A1P47881 315 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 NPBWR1P48145 328 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 BACE1P56817 501 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 RFTN2Q52LD8 501 aaPredicted RBP3.17□□□□□ -1.9
PMS1-203ENST00000409593 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 EMBQ6PCB8 327 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 SHQ1Q6PI26 577 aaKnown RBP3.17□□□□□ -1.9
PMS1-203ENST00000409593 METTL23Q86XA0 190 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 C4orf19Q8IY42 314 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 ELMOD1Q8N336 334 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 KIAA1524Q8TCG1 905 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 CD99L2Q8TCZ2 262 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 LIPHQ8WWY8 451 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 ANKRD27Q96NW4 1050 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 MARCH7Q9H992 704 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 TERF2IPQ9NYB0 399 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 MGAT4AQ9UM21 535 aa3.17□□□□□ -1.9
PMS1-203ENST00000409593 HBS1LQ9Y450 684 aaKnown RBP3.17□□□□□ -1.9
PMS1-203ENST00000409593 ATRXP46100 2492 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 RALGAPA1Q6GYQ0 2036 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 LOC390937A0A1W2PQ73 354 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 TMCO5BA8MYB1 307 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 SCO2O43819 266 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 ZFYP08048 801 aaPredicted RBP3.16□□□□□ -1.9
PMS1-203ENST00000409593 POM121L1PQ3SYA9 428 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 RNF212Q495C1 297 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 CASC4Q6P4E1 433 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 TMED8Q6PL24 325 aaPredicted RBP3.16□□□□□ -1.9
PMS1-203ENST00000409593 KIAA0895Q8NCT3 520 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 AGAP11Q8TF27 550 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 SLC35C1Q96A29 364 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 RUNDC3BQ96NL0 473 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 ALKBH3Q96Q83 286 aaPredicted RBP3.16□□□□□ -1.9
PMS1-203ENST00000409593 PRMT1Q99873 361 aaKnown RBP3.16□□□□□ -1.9
PMS1-203ENST00000409593 LSG1Q9H089 658 aaKnown RBP3.16□□□□□ -1.9
PMS1-203ENST00000409593 LIME1Q9H400 295 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 ABCD2Q9UBJ2 740 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 GIMAP2Q9UG22 337 aa3.16□□□□□ -1.9
PMS1-203ENST00000409593 IGLON5A6NGN9 336 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 FBP2O00757 339 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 GRAP2O75791 330 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 SOAT1P35610 550 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 MATKP42679 507 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 PRELPP51888 382 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 TFCP2Q12800 502 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 CEACAM7Q14002 265 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 C3AR1Q16581 482 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 TWISTNBQ3B726 338 aaPredicted RBP3.15□□□□□ -1.9
PMS1-203ENST00000409593 TEX35Q5T0J7 233 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 RNLSQ5VYX0 342 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 PET117Q6UWS5 81 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 ANKRD46Q86W74 232 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 ZBED8Q8IZ13 594 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 CARNMT1Q8N4J0 409 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 CD177Q8N6Q3 437 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 DNASE1L2Q92874 299 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 SGF29Q96ES7 293 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 ZNF274Q96GC6 653 aaPredicted RBP3.15□□□□□ -1.9
PMS1-203ENST00000409593 SLC39A8Q9C0K1 460 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 SH3GLB2Q9NR46 395 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 THYN1Q9P016 225 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 ZNF581Q9P0T4 197 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms