RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZNF26P17031 533 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 GAP43P17677 238 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 TYMPP19971 482 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 ACKR3P25106 362 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 FEN1P39748 380 aaKnown RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 RABIFP47224 123 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 HNRNPFP52597 415 aaKnown RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 KCNK10P57789 538 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 BPIFB3P59826 476 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 HERV-K104P63124 156 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 DRP2Q13474 957 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 TAB1Q15750 504 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 C3AR1Q16581 482 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 SGSM1Q2NKQ1 1148 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 WSCD2Q2TBF2 565 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZFP69Q49AA0 526 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 EPC2Q52LR7 807 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 KLHL22Q53GT1 634 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 TCEAL6Q6IPX3 200 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 CNSTQ6PJW8 725 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 Q6ZVQ6 151 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 CHMP1BQ7LBR1 199 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 ADAMTSL2Q86TH1 951 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 FBXW8Q8N3Y1 598 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 CCDC185Q8N715 623 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 TMEM99Q8N816 258 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 RELL2Q8NC24 303 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 CCDC197Q8NCU1 140 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 CFAP36Q96G28 342 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 RUNDC3BQ96NL0 473 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF577Q9BSK1 485 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 XPO4Q9C0E2 1151 aaKnown RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 TNMDQ9H2S6 317 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 FGF22Q9HCT0 170 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 PRMT8Q9NR22 394 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 KLHL8Q9P2G9 620 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 BAIAP2L1Q9UHR4 511 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 ODF2LQ9ULJ1 636 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 RPH3AQ9Y2J0 694 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 CSNK1G3Q9Y6M4 447 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 ATP6AP2A0A1C7CYW4 349 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 SERINC4A6NH21 518 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 G3V2L1 256 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLC28A1O00337 649 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 NR5A2O00482 541 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 SURF4O15260 269 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 P2RX6O15547 441 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 HTATSF1O43719 755 aaKnown RBP3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 HSF2BPO75031 334 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 CPNE6O95741 557 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 EPOP01588 193 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 IGKV3-20P01619 116 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 LYNP07948 512 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZCCHC18P0CG32 403 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 PCP11498 1178 aaKnown RBP3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 AREGP15514 252 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 FERP16591 822 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 C4BPBP20851 252 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 GPX3P22352 226 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 AHCYP23526 432 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 CNN1P51911 297 aaKnown RBP3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 IL1RL1Q01638 556 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 WASHC5Q12768 1159 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 MSLNQ13421 630 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 HEPACAMQ14CZ8 416 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 HLA-BQ31612 363 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 TAF1BQ53T94 588 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZCCHC12Q6PEW1 402 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 FIP1L1Q6UN15 594 aaKnown RBP3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 B3GLCTQ6Y288 498 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 WDR88Q6ZMY6 472 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 RFPL4BQ6ZWI9 263 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 TMEM185AQ8NFB2 350 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR4L1Q8NH43 312 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 EXOC6Q8TAG9 804 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZNF519Q8TB69 540 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 MRGPRDQ8TDS7 321 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 PCED1BQ96HM7 432 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 GUCD1Q96NT3 240 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 FAM213AQ9BRX8 229 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 TSPYL1Q9H0U9 437 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 CXXC4Q9H2H0 198 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 FNDC4Q9H6D8 234 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZDHHC6Q9H6R6 413 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 PIGVQ9NUD9 493 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 PLEK2Q9NYT0 353 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 NINJ2Q9NZG7 142 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 HMG20BQ9P0W2 317 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZNF319Q9P2F9 582 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 IL19Q9UHD0 177 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 UBQLN2Q9UHD9 624 aa3.33□□□□□ -1.88
HMGB1P17-201ENST00000403495 hCG_38984A0A1B0GV85 526 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 SHISA7A6NL88 538 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 OGTO15294 1046 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 KRT86O43790 486 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 STAM2O75886 525 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 NXPH2O95156 264 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 ALPPP05187 535 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZSCAN5DPP0CG00 497 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 TPBGLP0DKB5 382 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms