RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 NAALAD2Q9Y3Q0 740 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 ARGFXA6NJG6 315 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 H3BQF6 201 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 SGK494L7N484 410 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 LYPLA1O75608 230 aaPredicted RBP24.05■■□□□ 1.44
U2AF1-203ENST00000398137 KLF7O75840 302 aaPredicted RBP24.05■■□□□ 1.44
U2AF1-203ENST00000398137 PDYNP01213 254 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 KRT6AP02538 564 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 KRT6BP04259 564 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 FBLP22087 321 aaKnown RBP24.05■■□□□ 1.44
U2AF1-203ENST00000398137 SERPINB5P36952 375 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 AVPR1BP47901 424 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 KRT6CP48668 564 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 PLA2G16P53816 162 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 IGFBP7Q16270 282 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 HSP90B2PQ58FF3 399 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 C10orf62Q5T681 223 aaPredicted RBP24.05■■□□□ 1.44
U2AF1-203ENST00000398137 KHDRBS2Q5VWX1 349 aaKnown RBP24.05■■□□□ 1.44
U2AF1-203ENST00000398137 ASB18Q6ZVZ8 466 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 COX15Q7KZN9 410 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 COL26A1Q96A83 441 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 EML4Q9HC35 981 aaKnown RBP24.05■■□□□ 1.44
U2AF1-203ENST00000398137 ZNF304Q9HCX3 659 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 IFT80Q9P2H3 777 aaPredicted RBP24.05■■□□□ 1.44
U2AF1-203ENST00000398137 FIS1Q9Y3D6 152 aa24.05■■□□□ 1.44
U2AF1-203ENST00000398137 TMEM114B3SHH9 223 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 C9J4A7 227 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 FOXE1O00358 373 aaPredicted RBP24.04■■□□□ 1.44
U2AF1-203ENST00000398137 SAP18O00422 153 aaKnown RBP24.04■■□□□ 1.44
U2AF1-203ENST00000398137 ITM2AO43736 263 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 GALR3O60755 368 aaPredicted RBP24.04■■□□□ 1.44
U2AF1-203ENST00000398137 CNOT3O75175 753 aaKnown RBP24.04■■□□□ 1.44
U2AF1-203ENST00000398137 RDH16O75452 317 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 NSA2O95478 260 aaKnown RBP24.04■■□□□ 1.44
U2AF1-203ENST00000398137 ETHE1O95571 254 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 FOXK1P85037 733 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 KLRB1Q12918 225 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 CLEC6AQ6EIG7 209 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 TRIM40Q6P9F5 258 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 OR2L5Q8NG80 312 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 AGR3Q8TD06 166 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 C17orf62Q9BQA9 187 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 ING2Q9H160 280 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 ZNF395Q9H8N7 513 aaPredicted RBP24.04■■□□□ 1.44
U2AF1-203ENST00000398137 HCN3Q9P1Z3 774 aa24.04■■□□□ 1.44
U2AF1-203ENST00000398137 HSPA4LO95757 839 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 SMIM10L1P0DMW3 83 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 CHN1P15882 459 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 GRK2P25098 689 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 SERPINB3P29508 390 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 RAP1GDS1P52306 607 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 FOXL2P58012 376 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 ABCE1P61221 599 aaKnown RBP24.03■■□□□ 1.44
U2AF1-203ENST00000398137 BTN3A2P78410 334 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 MAT1AQ00266 395 aaKnown RBP24.03■■□□□ 1.44
U2AF1-203ENST00000398137 DSG2Q14126 1118 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 SYT16Q17RD7 645 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 TMEM35AQ53FP2 167 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 MLIPQ5VWP3 458 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 CHSY3Q70JA7 882 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 UBE3DQ7Z6J8 389 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 AMER3Q8N944 861 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 SMIM10Q96HG1 83 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 MED4Q9NPJ6 270 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 CTSFQ9UBX1 484 aa24.03■■□□□ 1.44
U2AF1-203ENST00000398137 GPN3Q9UHW5 284 aaPredicted RBP24.03■■□□□ 1.44
U2AF1-203ENST00000398137 NBASA2RRP1 2371 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 TMEM233B4DJY2 109 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 AZIN1O14977 448 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 CEACAM4O75871 244 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 PTX3P26022 381 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-203ENST00000398137 OLR1P78380 273 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 TGM3Q08188 693 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 GALNT1Q10472 559 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-203ENST00000398137 BST1Q10588 318 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 STX3Q13277 289 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 SH2D4BQ5SQS7 431 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 DEPDC1Q5TB30 811 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 ABHD17CQ6PCB6 329 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 SCIMPQ6UWF3 145 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 FAR2Q96K12 515 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 SERPINI1Q99574 410 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 TRPC4Q9UBN4 977 aa24.02■■□□□ 1.44
U2AF1-203ENST00000398137 H0YIG0 161 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 RTCAO00442 366 aaKnown RBP24.01■■□□□ 1.43
U2AF1-203ENST00000398137 ULK1O75385 1050 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 ONECUT2O95948 504 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 UROSP10746 265 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 PIM1P11309 404 aaPredicted RBP24.01■■□□□ 1.43
U2AF1-203ENST00000398137 SLC1A6P48664 564 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 CCL11P51671 97 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 SKP1P63208 163 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 ABRAXAS2Q15018 415 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 KANK2Q63ZY3 851 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 OR5T3Q8NGG3 340 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 FKBP10Q96AY3 582 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 QRFPRQ96P65 431 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 CENPKQ9BS16 269 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 YIPF2Q9BWQ6 316 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 SORBS1Q9BX66 1292 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms