RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 LIN28AQ9H9Z2 209 aaKnown RBP12.83□□□□□ -0.36
CXCL12-202ENST00000374426 TIMMDC1Q9NPL8 285 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 TNFRSF10DQ9UBN6 386 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 CORO1CQ9ULV4 474 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-202ENST00000374426 YARS2Q9Y2Z4 477 aaKnown RBP12.83□□□□□ -0.36
CXCL12-202ENST00000374426 KCNE2Q9Y6J6 123 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 ABCA4P78363 2273 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 A0A0G2JN53 185 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 USP27XA6NNY8 438 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 FOXO6A8MYZ6 492 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 PGRMC1O00264 195 aaKnown RBP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 CDC7O00311 574 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 OR2J2O76002 312 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 ZNF37AP17032 561 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 HNRNPH1P31943 449 aaKnown RBP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 HSD17B7P56937 341 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 STXBP1P61764 594 aaKnown RBP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 PPIAP62937 165 aaKnown RBP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 PMPCAQ10713 525 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 XKR6Q5GH73 641 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 FAM45BPQ6NSW5 357 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 TRMT10BQ6PF06 316 aaKnown RBP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 FAM45AQ8TCE6 357 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 GRK7Q8WTQ7 553 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 GAL3ST3Q96A11 431 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 NAP1L3Q99457 506 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 ZDHHC11Q9H8X9 412 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 KCNJ16Q9NPI9 418 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
CXCL12-202ENST00000374426 PRTFDC1Q9NRG1 225 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 IGSF5Q9NSI5 407 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 ERVK-11Q9UQG0 969 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 PPP2R2CQ9Y2T4 447 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 JRKLQ9Y4A0 524 aa12.82□□□□□ -0.36
CXCL12-202ENST00000374426 PHF3Q92576 2039 aaKnown RBP12.81□□□□□ -0.36
CXCL12-202ENST00000374426 A0A0G2JMM0 328 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 A0A1W2PPB8 328 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 A0A1W2PRS3 328 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 LRIT2A6NDA9 550 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 NPEPPSL1A6NEC2 478 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 FAM166BA8MTA8 275 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 A8MVJ9 347 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 KIR3DP1A8MWS1 328 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 NPIPA2E9PIF3 369 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 NPIPA3F8WFD2 350 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 DNALI1O14645 258 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-202ENST00000374426 ERI3O43414 337 aaKnown RBP12.81□□□□□ -0.36
CXCL12-202ENST00000374426 ZFAND5O76080 213 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 OR6B1O95007 311 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 HOXD4P09016 255 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-202ENST00000374426 CD1EP15812 388 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 SAT1P21673 171 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 NUP107P57740 925 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 CCZ1BP86790 482 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 CCZ1P86791 482 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-202ENST00000374426 SLC13A2Q13183 592 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 PPP1R7Q15435 360 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 BBS9Q3SYG4 887 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 GXYLT1Q4G148 440 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 SLCO4C1Q6ZQN7 724 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 LRRC8AQ8IWT6 810 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 GPALPP1Q8IXQ4 340 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 KLHDC8AQ8IYD2 350 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 FAM47BQ8NA70 645 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 OR2M7Q8NG81 312 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 MS4A6EQ96DS6 147 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 FAR2Q96K12 515 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 QRFPRQ96P65 431 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 CCDC77Q9BR77 488 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 WDR83Q9BRX9 315 aaKnown RBP12.81□□□□□ -0.36
CXCL12-202ENST00000374426 NPLQ9BXD5 320 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-202ENST00000374426 ADAP2Q9NPF8 381 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 PNPLA3Q9NST1 481 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 HPF1Q9NWY4 346 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 MYOTQ9UBF9 498 aa12.81□□□□□ -0.36
CXCL12-202ENST00000374426 PRRC2AP48634 2157 aaKnown RBP12.81□□□□□ -0.36
CXCL12-202ENST00000374426 HRNRQ86YZ3 2850 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-202ENST00000374426 CYR61O00622 381 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 CLDN4O14493 209 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 GLSO94925 669 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-202ENST00000374426 TBX6O95947 436 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-202ENST00000374426 C1GALT1C1LP0DN25 315 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 GNAZP19086 355 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 SOX3P41225 446 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 GDF5P43026 501 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 ART1P52961 327 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 RAB38P57729 211 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 CDKL1Q00532 357 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 PLGLB1Q02325 96 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 SLBPQ14493 270 aaKnown RBP eCLIP12.8□□□□□ -0.36
CXCL12-202ENST00000374426 ELAVL1Q15717 326 aaKnown RBP12.8□□□□□ -0.36
CXCL12-202ENST00000374426 C18orf21Q32NC0 220 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-202ENST00000374426 HP1BP3Q5SSJ5 553 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-202ENST00000374426 PAOXQ6QHF9 649 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 IL20RBQ6UXL0 311 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 TMIGD1Q6UXZ0 262 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 ACAD11Q709F0 780 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 CLNKQ7Z7G1 428 aa12.8□□□□□ -0.36
CXCL12-202ENST00000374426 ZNF595Q8IYB9 648 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms