RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 FAM156AQ8NDB6 213 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 ACOT12Q8WYK0 555 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 UFD1Q92890 307 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 ARL11Q969Q4 196 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 FUZQ9BT04 418 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 NKX6-2Q9C056 277 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 MMP28Q9H239 520 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 MTG2Q9H4K7 406 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 SRRDQ9UH36 339 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 IFT172Q9UG01 1749 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 FABP3P05413 133 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 MAGEB1P43366 347 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 RGS8P57771 180 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 SLC10A7Q0GE19 358 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 DYRK1AQ13627 763 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 CXorf57Q6NSI4 855 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 MCEMP1Q8IX19 187 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 RBM18Q96H35 190 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 FN3KQ9H479 309 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 TM9SF3Q9HD45 589 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 FKBP7Q9Y680 259 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 CIB4A0PJX0 185 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 ELOVL7A1L3X0 281 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 CPSF4LA6NMK7 179 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 CAPN14A8MX76 684 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 ADH5P11766 374 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 DCKP27707 260 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 WDR4P57081 412 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 TAS2R39P59534 338 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 LAPTM5Q13571 262 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 PTGR1Q14914 329 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 PON3Q15166 354 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 MBLAC2Q68D91 279 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 FBXL22Q6P050 247 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 ZNF529Q6P280 563 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 CLRN3Q8NCR9 226 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 SMPDL3BQ92485 455 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 SLC7A6OSQ96CW6 309 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 TTYH3Q9C0H2 523 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 MRPS30Q9NP92 439 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 WNT6Q9Y6F9 365 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 TNFRSF11BO00300 401 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 BHLHE40O14503 412 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 BRINP1O60477 761 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 PRAMEF2O60811 474 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 SLC22A5O76082 557 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 CREB1P16220 341 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 PTGER3P43115 390 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 PTP4A2Q12974 167 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 OLIG2Q13516 323 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 TRAM2Q15035 370 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 Q6ZVU0 165 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 YIPF7Q8N8F6 280 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 OR10A6Q8NH74 314 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 GTPBP3Q969Y2 492 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 CTPS2Q9NRF8 586 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 ASF1BQ9NVP2 202 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 DNAJB9Q9UBS3 223 aa10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 MRPS17Q9Y2R5 130 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-202ENST00000348513 XKRYO14609 159 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ADAM23O75077 832 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 NIPSNAP2O75323 286 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 MTHFD1P11586 935 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 PTX3P26022 381 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ACTR1BP42025 376 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 NSG1P42857 185 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 NRIP1P48552 1158 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ACTR1AP61163 376 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 C4orf46Q504U0 113 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ELP2Q6IA86 826 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 GHDCQ8N2G8 530 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 PHTF2Q8N3S3 785 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 BANPQ8N9N5 519 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 NDNFQ8TB73 568 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 LRRC46Q96FV0 321 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ACTR6Q9GZN1 396 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 IL37Q9NZH6 218 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 MFHAS1Q9Y4C4 1052 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 A0A096LPI6 279 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 DHPSP49366 369 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 GPX6P59796 221 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 BAK1Q16611 211 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 LRIF1Q5T3J3 769 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 GDPD4Q6W3E5 623 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ZNF600Q6ZNG1 722 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 TIPARPQ7Z3E1 657 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 AMZ2Q86W34 360 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 GPR65Q8IYL9 337 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 TSTD1Q8NFU3 115 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 NTPCRQ9BSD7 190 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 LHPPQ9H008 270 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ENPP5Q9UJA9 477 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 MEMO1Q9Y316 297 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 CLCA3PQ9Y6N3 262 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 SLIT2O94813 1529 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 LOC100130705A0A1B0GUX0 176 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 CPED1A4D0V7 1026 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 AGAP5A6NIR3 686 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 PSMD9O00233 223 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms