RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RIMS3Q9UJD0 308 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 NUP214P35658 2090 aaPredicted RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 GOLGA4Q13439 2230 aaKnown RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 A0A0A6YYD5 115 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 VILLO15195 856 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 BCAT2O15382 392 aaPredicted RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 GPR37L1O60883 481 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 C6orf47O95873 294 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 PDGFBP01127 241 aaPredicted RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 GPIP06744 558 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 ANXA6P08133 673 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 PEX2P28328 305 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 POLE2P56282 527 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 TRA2BP62995 288 aaKnown RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 RGS1Q08116 209 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 ABHD18Q0P651 414 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 BIRC2Q13490 618 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 TAF11Q15544 211 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 TBCELQ5QJ74 424 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 WLSQ5T9L3 541 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 FCRL6Q6DN72 434 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 CALHM3Q86XJ0 350 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 LILRA2Q8N149 483 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 AMER3Q8N944 861 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 AVL9Q8NBF6 648 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 SRFBP1Q8NEF9 429 aaKnown RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 DNAJC9Q8WXX5 260 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 FCRL4Q96PJ5 515 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 KCNC2Q96PR1 638 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 SYNPO2LQ9H987 977 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 CCM2LQ9NUG4 571 aaPredicted RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 DLGAP2Q9P1A6 1054 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 ZNF282Q9UDV7 671 aaPredicted RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 TP53BP1Q12888 1972 aaPredicted RBP20.43■□□□□ 0.86
SPAST-204ENST00000621856 THADAQ6YHU6 1953 aa20.43■□□□□ 0.86
SPAST-204ENST00000621856 SPAG17Q6Q759 2223 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 A0A0J9YY10 115 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 TCRBV5S2A0A599 114 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 CASQ2O14958 399 aaPredicted RBP20.42■□□□□ 0.86
SPAST-204ENST00000621856 AQP9O43315 295 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 FKBP9O95302 570 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 ZCCHC18P0CG32 403 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 TYRP1P17643 537 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 IL10P22301 178 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 FNTBP49356 437 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 TGM3Q08188 693 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 PRSS53Q2L4Q9 553 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 FBXO42Q6P3S6 717 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 ABHD17CQ6PCB6 329 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 ZNF793Q6ZN11 406 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 FAM47BQ8NA70 645 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 PHF12Q96QT6 1004 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 RPF2Q9H7B2 306 aaKnown RBP20.42■□□□□ 0.86
SPAST-204ENST00000621856 ERVK-11Q9UQG0 969 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 KNL1Q8NG31 2342 aa20.42■□□□□ 0.86
SPAST-204ENST00000621856 A0A0J9YVX5 310 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 A0A1W2PRB8 838 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 OR5K3A6NET4 321 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 PPIBP23284 216 aaKnown RBP20.41■□□□□ 0.86
SPAST-204ENST00000621856 AFF3P51826 1226 aaKnown RBP20.41■□□□□ 0.86
SPAST-204ENST00000621856 ARFIP1P53367 373 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 SLC14A1Q13336 389 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 MPEG1Q2M385 716 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 GRAMD1BQ3KR37 738 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 IRAK1BP1Q5VVH5 260 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 MAMSTRQ6ZN01 415 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 VN1R4Q7Z5H5 301 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 ADGRG5Q8IZF4 528 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 C10orf111Q8N326 155 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 ARL14Q8N4G2 192 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 OR8K5Q8NH50 307 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 PNPT1Q8TCS8 783 aaKnown RBP20.41■□□□□ 0.86
SPAST-204ENST00000621856 NCLNQ969V3 563 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 KLHL4Q9C0H6 718 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 SLC6A16Q9GZN6 736 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 TPT1P8Q9HAU6 139 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 ARMC1Q9NVT9 282 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 TEX10Q9NXF1 929 aaPredicted RBP20.41■□□□□ 0.86
SPAST-204ENST00000621856 ANAPC2Q9UJX6 822 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 LRRC42Q9Y546 428 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 C4orf51C9J302 202 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 CXCR6O00574 342 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 TBX19O60806 448 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 CTSVO60911 334 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 FAM58BPP0C7Q3 252 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 SLC35G6P0C7Q6 338 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 UMPSP11172 480 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 PVRP15151 417 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 GZMMP51124 257 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 RAB8AP61006 207 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 HBA1P69905 142 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 SLAMF1Q13291 335 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 GAB1Q13480 694 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 SLC9A5Q14940 896 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 MTX3Q5HYI7 312 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.41■□□□□ 0.86
SPAST-204ENST00000621856 IZUMO2Q6UXV1 221 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 NT5CQ8TCD5 201 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 LRTOMTQ8WZ04 291 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 RSC1A1Q92681 617 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms