RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 FHP07954 510 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 NUDT17P0C025 328 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 C8orf89P0DMQ9 161 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 RNH1P13489 461 aaKnown RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 HNRNPH1P31943 449 aaKnown RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ARL1P40616 181 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PIK3CBP42338 1070 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 CCNG1P51959 295 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 AP2B1P63010 937 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 BTN3A2P78410 334 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PRR20EP86478 221 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PRR20CP86479 221 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PRR20DP86480 221 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PRR20BP86481 221 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PRR20AP86496 221 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 IFFO1Q0D2I5 559 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 TMEM35AQ53FP2 167 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 TMEM205Q6UW68 189 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ASB18Q6ZVZ8 466 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 CHSY3Q70JA7 882 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 VN1R5Q7Z5H4 357 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 SLC22A9Q8IVM8 553 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 TMEM151AQ8N4L1 468 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 L3MBTL4Q8NA19 623 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PLPP5Q8NEB5 264 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 OR7G3Q8NG95 312 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 OR5T3Q8NGG3 340 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 EPS8L3Q8TE67 593 aaKnown RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF473Q8WTR7 871 aaKnown RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 CMTM7Q96FZ5 175 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 CENPKQ9BS16 269 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 NTMT1Q9BV86 223 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 C1QTNF3Q9BXJ4 246 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 MS4A8Q9BY19 250 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PARD6BQ9BYG5 372 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ROGDIQ9GZN7 287 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 NOL11Q9H8H0 719 aaKnown RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 COPS7BQ9H9Q2 264 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 MLXIPLQ9NP71 852 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 RIC8BQ9NVN3 520 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 C5AR2Q9P296 337 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PCTPQ9UKL6 214 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ZFYVE26Q68DK2 2539 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ATMQ13315 3056 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 NSG1A0A0A6YYJ2 146 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 A0A1W2PPM1 405 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 A8MT66 165 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 H0YIV9 168 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 B3GALT2O43825 422 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 JRKO75564 520 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 B3GALT4O96024 378 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 RPS17P08708 135 aaKnown RBP11.78□□□□□ -0.52
SLIRP-211ENST00000557623 SBK3P0C264 359 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 COX6A1P12074 109 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 ICAM2P13598 275 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 ITGA3P26006 1051 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 CCT5P48643 541 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 MTTPP55157 894 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 OLR1P78380 273 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 KLRB1Q12918 225 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 RCN2Q14257 317 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 VWA5B1Q5TIE3 1220 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 FAAH2Q6GMR7 532 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 ADAMTS18Q8TE60 1221 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 PPP4R1Q8TF05 950 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 C8orf44Q96CB5 159 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 CCDC126Q96EE4 140 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 KCNC2Q96PR1 638 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 SERINC2Q96SA4 455 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 SMAD5Q99717 465 aaKnown RBP11.78□□□□□ -0.52
SLIRP-211ENST00000557623 TBCDQ9BTW9 1192 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 NUDT9Q9BW91 350 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 ROPN1BQ9BZX4 212 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-211ENST00000557623 AICDAQ9GZX7 198 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF700Q9H0M5 742 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 ROPN1Q9HAT0 212 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-211ENST00000557623 ANAPC2Q9UJX6 822 aa11.78□□□□□ -0.52
SLIRP-211ENST00000557623 IGHV1-45A0A0A0MS14 117 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 TLDC2A0PJX2 215 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 MAGEB17A8MXT2 336 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 C4orf51C9J302 202 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 OR7A17O14581 309 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 DPM1O60762 260 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 TBX6O95947 436 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 OTCP00480 354 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 TGFB1P01137 390 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 ATP5F1P24539 256 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 CRHR1P34998 444 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 ARFIP1P53367 373 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 PLA2G16P53816 162 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 HERVK_113P63132 956 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 RHAGQ02094 409 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 EEF1A2Q05639 463 aaKnown RBP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 DDX39BQ13838 428 aaKnown RBP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 CPSF6Q16630 551 aaKnown RBP eCLIP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 CCDC153Q494R4 210 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 C10orf62Q5T681 223 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms