RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 SELENOMQ8WWX9 145 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 MTFMTQ96DP5 389 aaKnown RBP11.48□□□□□ -0.57
HDAC7-226ENST00000547259 THAP11Q96EK4 314 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 C7orf26Q96N11 449 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 FRG2BQ96QU4 278 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 SARGQ9BW04 601 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 CCDC134Q9H6E4 229 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 SLCO1B3Q9NPD5 702 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 FGF21Q9NSA1 209 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 MARCOQ9UEW3 520 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-226ENST00000547259 ZDHHC2Q9UIJ5 367 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 ZFP69BQ9UJL9 534 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 ZNF490Q9ULM2 529 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-226ENST00000547259 PLCL2Q9UPR0 1127 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 FARSAQ9Y285 508 aaKnown RBP11.48□□□□□ -0.57
HDAC7-226ENST00000547259 ZNF451Q9Y4E5 1061 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 TRAF6Q9Y4K3 522 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 TMEM150CB9EJG8 249 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 H0YGG7 62 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 NDUFS4O43181 175 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 LCMT2O60294 686 aaKnown RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 DPM1O60762 260 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 CPNE3O75131 537 aaKnown RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 SKAP2O75563 359 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 DDAH2O95865 285 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 STATHP02808 62 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 EIF2S1P05198 315 aaKnown RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 FGF4P08620 206 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 VIMP08670 466 aaKnown RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 FURINP09958 794 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 KITP10721 976 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 FOLR1P15328 257 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 GSTM2P28161 218 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 SERPINB3P29508 390 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 SERPINB1P30740 379 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 AHRP35869 848 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 GABRA4P48169 554 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 HTR6P50406 440 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 NEK2P51955 445 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 ARF3P61204 181 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 GNGT1P63211 74 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 C10orf62Q5T681 223 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 ADNP2Q6IQ32 1131 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 PWWP2BQ6NUJ5 590 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 FBXO42Q6P3S6 717 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 MTERF4Q7Z6M4 381 aaKnown RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 ASPGQ86U10 573 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 HOMEZQ8IX15 550 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 ZNF655Q8N720 491 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 TRPV3Q8NET8 790 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 HUS1BQ8NHY5 278 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 WDR20Q8TBZ3 569 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 TWIST2Q8WVJ9 160 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 SEC16BQ96JE7 1060 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 FAR2Q96K12 515 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 LRFN5Q96NI6 719 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 OR2A5Q96R48 311 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 MTERF1Q99551 399 aaKnown RBP11.47□□□□□ -0.57
HDAC7-226ENST00000547259 NLNQ9BYT8 704 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 RHBGQ9H310 441 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 PNPOQ9NVS9 261 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 ADGRE2Q9UHX3 823 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 HAO1Q9UJM8 370 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 AP1M2Q9Y6Q5 423 aa11.47□□□□□ -0.57
HDAC7-226ENST00000547259 DOPEY1Q5JWR5 2465 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 SHANK1Q9Y566 2161 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 LOC105369274A0A096LPK9 316 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 LOC102723532A0A0G2JNH3 316 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 P2RX6O15547 441 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 HCRTR1O43613 425 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 SRPX2O60687 465 aaPredicted RBP11.46□□□□□ -0.57
HDAC7-226ENST00000547259 EDF1O60869 148 aaKnown RBP11.46□□□□□ -0.57
HDAC7-226ENST00000547259 ULK1O75385 1050 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 SCRG1O75711 98 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 PDYNP01213 254 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 SLC35G6P0C7Q6 338 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 RGS1Q08116 209 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 ABRAXAS2Q15018 415 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 PDCD2Q16342 344 aaPredicted RBP11.46□□□□□ -0.57
HDAC7-226ENST00000547259 TCTE1Q5JU00 501 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 SCIMPQ6UWF3 145 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 VN1R4Q7Z5H5 301 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 TMEM126BQ8IUX1 230 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 DDIASQ8IXT1 998 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 OR4N4Q8N0Y3 316 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 RNF175Q8N4F7 328 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 CSNK1A1LQ8N752 337 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 TTC29Q8NA56 475 aaPredicted RBP11.46□□□□□ -0.57
HDAC7-226ENST00000547259 CAMKVQ8NCB2 501 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 PIWIL2Q8TC59 973 aaKnown RBP11.46□□□□□ -0.57
HDAC7-226ENST00000547259 ZNF473Q8WTR7 871 aaKnown RBP11.46□□□□□ -0.57
HDAC7-226ENST00000547259 SSC4DQ8WTU2 575 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 SLC13A3Q8WWT9 602 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 HBEGFQ99075 208 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 ING2Q9H160 280 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 SYNPO2LQ9H987 977 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 DMRT3Q9NQL9 472 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 FARSBQ9NSD9 589 aaKnown RBP11.46□□□□□ -0.57
HDAC7-226ENST00000547259 PLEKHB1Q9UF11 243 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms