RNA–Protein interactions for RNA: ENST00000529464.5

FDFT1-215, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-215ENST00000529464 CA13Q8N1Q1 262 aa13.34□□□□□ -0.27
FDFT1-215ENST00000529464 TBC1D19Q8N5T2 526 aa13.34□□□□□ -0.27
FDFT1-215ENST00000529464 NFAM1Q8NET5 270 aaPredicted RBP13.34□□□□□ -0.27
FDFT1-215ENST00000529464 GABPB2Q8TAK5 448 aaPredicted RBP13.34□□□□□ -0.27
FDFT1-215ENST00000529464 FAM45AQ8TCE6 357 aa13.34□□□□□ -0.27
FDFT1-215ENST00000529464 ATL1Q8WXF7 558 aa13.34□□□□□ -0.27
FDFT1-215ENST00000529464 NAT9Q9BTE0 207 aa13.34□□□□□ -0.27
FDFT1-215ENST00000529464 PELI2Q9HAT8 420 aa13.34□□□□□ -0.27
FDFT1-215ENST00000529464 ZDHHC18Q9NUE0 388 aa13.34□□□□□ -0.27
FDFT1-215ENST00000529464 OTOGQ6ZRI0 2925 aa13.34□□□□□ -0.27
FDFT1-215ENST00000529464 TEP1Q99973 2627 aaKnown RBP13.34□□□□□ -0.27
FDFT1-215ENST00000529464 TCRBV16S1A1N1A0A5B0 115 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 SAGE2PA6NJ88 616 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 NME2P1O60361 137 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 ENO2P09104 434 aaPredicted RBP13.33□□□□□ -0.28
FDFT1-215ENST00000529464 SMIM10L1P0DMW3 83 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 ZNF37AP17032 561 aaPredicted RBP13.33□□□□□ -0.28
FDFT1-215ENST00000529464 NME2P22392 152 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 ELAVL4P26378 380 aaKnown RBP13.33□□□□□ -0.28
FDFT1-215ENST00000529464 PPP2R1BP30154 601 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 PTGER1P34995 402 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 AHRP35869 848 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 GDF5P43026 501 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 MLF1P58340 268 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 KRTCAP3Q53RY4 240 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 STEAP4Q687X5 459 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 Q6ZPB1 254 aaPredicted RBP13.33□□□□□ -0.28
FDFT1-215ENST00000529464 QSOX2Q6ZRP7 698 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 GDF7Q7Z4P5 450 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 PDIK1LQ8N165 341 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 FBXO25Q8TCJ0 367 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 CREB3L4Q8TEY5 395 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 ANKRD49Q8WVL7 239 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 SREK1Q8WXA9 508 aaKnown RBP13.33□□□□□ -0.28
FDFT1-215ENST00000529464 SMIM10Q96HG1 83 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 TRIM8Q9BZR9 551 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 RUBCNLQ9H714 662 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 ZFATQ9P243 1243 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 MEMO1Q9Y316 297 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 TEX264Q9Y6I9 313 aa13.33□□□□□ -0.28
FDFT1-215ENST00000529464 SCN3AQ9NY46 2000 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 TRBV11-1A0A0K0K1C0 115 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 TGFBR3LH3BV60 316 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 PSMD12O00232 456 aaPredicted RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 PIAS1O75925 651 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 RNH1P13489 461 aaKnown RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 ABOP16442 354 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 ZNF24P17028 368 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 KIR3DL1P43629 444 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 CYB561P49447 251 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 HNRNPFP52597 415 aaKnown RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 SMSP52788 366 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 PLTPP55058 493 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 TAS2R39P59534 338 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 VSNL1P62760 191 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 BTN3A2P78410 334 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 FASTKD3Q14CZ7 662 aaKnown RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 MORF4L2Q15014 288 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 TSNQ15631 228 aaKnown RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 MYO7BQ6PIF6 2116 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 XKRXQ6PP77 449 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 DOLPP1Q86YN1 238 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.32□□□□□ -0.285e-17■■■■■ 44.8
FDFT1-215ENST00000529464 GSPT2Q8IYD1 628 aaKnown RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 ZNF295-AS1Q8N0V1 137 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 HORMAD2Q8N7B1 307 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 TMEM52Q8NDY8 209 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 MYRIPQ8NFW9 859 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 AGAP11Q8TF27 550 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 IFT81Q8WYA0 676 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 PDLIM5Q96HC4 596 aaKnown RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 LURAP1Q96LR2 239 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 EGFL8Q99944 293 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 AIF1LQ9BQI0 150 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 DEFB126Q9BYW3 111 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 CHST11Q9NPF2 352 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 PRDM9Q9NQV7 894 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 ZNF223Q9UK11 482 aaPredicted RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 CORO1CQ9ULV4 474 aaPredicted RBP13.32□□□□□ -0.28
FDFT1-215ENST00000529464 ASB1Q9Y576 335 aa13.32□□□□□ -0.28
FDFT1-215ENST00000529464 FAM95CA0A1B0GW59 222 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 ADAM10O14672 748 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
FDFT1-215ENST00000529464 MYO1DO94832 1006 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 MLYCDO95822 493 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 HNRNPH1P31943 449 aaKnown RBP13.31□□□□□ -0.28
FDFT1-215ENST00000529464 PTGER4P35408 488 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 MEOX1P50221 254 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 HLCSP50747 726 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 NR0B1P51843 470 aaKnown RBP13.31□□□□□ -0.28
FDFT1-215ENST00000529464 SKP1P63208 163 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 CALCOCO2Q13137 446 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 RUNX2Q13950 521 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 FBXO48Q5FWF7 155 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 ADNP2Q6IQ32 1131 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 C16orf47Q6ZP98 133 aaPredicted RBP13.31□□□□□ -0.28
FDFT1-215ENST00000529464 ZC3HC1Q86WB0 502 aaKnown RBP13.31□□□□□ -0.28
FDFT1-215ENST00000529464 CEP97Q8IW35 865 aa13.31□□□□□ -0.28
FDFT1-215ENST00000529464 IFT20Q8IY31 132 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms