RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 IL20RBQ6UXL0 311 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 ABHD13Q7L211 337 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 PIWIL4Q7Z3Z4 852 aaKnown RBP15.97■□□□□ 0.15
VIM-204ENST00000478746 GPALPP1Q8IXQ4 340 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 WFDC11Q8NEX6 87 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 KCNJ9Q92806 393 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 GPR21Q99679 349 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 CCDC77Q9BR77 488 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 TTTY12Q9BZ98 90 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 TSGA10Q9BZW7 698 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 TRIM5Q9C035 493 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 RHBGQ9H310 441 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 CLK4Q9HAZ1 481 aaKnown RBP15.97■□□□□ 0.15
VIM-204ENST00000478746 MED16Q9Y2X0 877 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 MPDZO75970 2070 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 NSD1Q96L73 2696 aaPredicted RBP15.96■□□□□ 0.15
VIM-204ENST00000478746 JMJD1CQ15652 2540 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 A0A1B0GVC2 190 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 FAM47E-STBD1D6RA91 191 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 SYT5O00445 386 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 IGHG3P01860 377 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 RAF1P04049 648 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 UQCRC1P31930 480 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 NDUFAF5Q5TEU4 345 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 ZNF549Q6P9A3 640 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 C4orf22Q6V702 233 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 TRILQ7L0X0 811 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 CPNE9Q8IYJ1 553 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 TBC1D19Q8N5T2 526 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 ABHD11Q8NFV4 315 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 FAM222BQ8WU58 562 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 ASB15Q8WXK1 588 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 VMP1Q96GC9 406 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 HES6Q96HZ4 224 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 HAUS8Q9BT25 410 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 SARGQ9BW04 601 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 SGPP1Q9BX95 441 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 LIN28AQ9H9Z2 209 aaKnown RBP15.96■□□□□ 0.15
VIM-204ENST00000478746 PNO1Q9NRX1 252 aaKnown RBP15.96■□□□□ 0.15
VIM-204ENST00000478746 ALKBH4Q9NXW9 302 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 ZNF223Q9UK11 482 aaPredicted RBP15.96■□□□□ 0.15
VIM-204ENST00000478746 PDE10AQ9Y233 779 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 LIPGQ9Y5X9 500 aa15.96■□□□□ 0.15
VIM-204ENST00000478746 TRBC2A0A5B9 178 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 WDR1O75083 606 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 OR2J2O76002 312 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 ZFAND5O76080 213 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 F7P08709 466 aaPredicted RBP15.95■□□□□ 0.14
VIM-204ENST00000478746 INHBBP09529 407 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 CNR1P21554 472 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 RAB8AP61006 207 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 KEAP1Q14145 624 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 DEFB113Q30KQ7 82 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 FLYWCH1Q4VC44 716 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 C1orf185Q5T7R7 199 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 WLSQ5T9L3 541 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 SEL1L2Q5TEA6 688 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 HECTD2Q5U5R9 776 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 TMEM198Q66K66 360 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 ZNF470Q6ECI4 717 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 PAMR1Q6UXH9 720 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 CLEC9AQ6UXN8 241 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 MBOAT1Q6ZNC8 495 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 C16orf47Q6ZP98 133 aaPredicted RBP15.95■□□□□ 0.14
VIM-204ENST00000478746 PALM2Q8IXS6 379 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 OR4K1Q8NGD4 311 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 NT5CQ8TCD5 201 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 CD200R1Q8TD46 325 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 UTP15Q8TED0 518 aaKnown RBP15.95■□□□□ 0.14
VIM-204ENST00000478746 NCLNQ969V3 563 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 PARVBQ9HBI1 364 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 DMRT3Q9NQL9 472 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 FBXO6Q9NRD1 293 aaPredicted RBP15.95■□□□□ 0.14
VIM-204ENST00000478746 B4GALT7Q9UBV7 327 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 ADAMTS6Q9UKP5 1117 aa15.95■□□□□ 0.14
VIM-204ENST00000478746 A0A0G2JMM0 328 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 A0A1W2PPB8 328 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 A0A1W2PRS3 328 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 URADA6NGE7 173 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 KIR3DP1A8MWS1 328 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 G3V3Y1 287 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 AQP7O14520 342 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 SUSD5O60279 629 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 GLSO94925 669 aaPredicted RBP15.94■□□□□ 0.14
VIM-204ENST00000478746 HNF4AP41235 474 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 MAGEA5P43359 124 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 MAN2A2P49641 1150 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 CTBP1Q13363 440 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 THOC5Q13769 683 aaKnown RBP15.94■□□□□ 0.14
VIM-204ENST00000478746 SLC10A1Q14973 349 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 TERF2Q15554 542 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 XKR6Q5GH73 641 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 RIPPLY2Q5TAB7 128 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 FBXW10Q5XX13 1052 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 GK5Q6ZS86 529 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 STRA8Q7Z7C7 330 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 KIAA1328Q86T90 577 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 SLC13A5Q86YT5 568 aaPredicted RBP15.94■□□□□ 0.14
VIM-204ENST00000478746 FAM109AQ8N4B1 249 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 TMEM251Q8N6I4 163 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms