RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 C1QTNF3Q9BXJ4 246 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ERVK-6Q9BXR3 956 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TGIF2Q9GZN2 237 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 EPS8L2Q9H6S3 715 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NOL11Q9H8H0 719 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SENP1Q9P0U3 644 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CTSFQ9UBX1 484 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PCTPQ9UKL6 214 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MRPS2Q9Y399 296 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NAALAD2Q9Y3Q0 740 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TSC22D4Q9Y3Q8 395 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MED13Q9UHV7 2174 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 IGLV3-12A0A075B6K2 115 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LRIT2A6NDA9 550 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 FOXO6A8MYZ6 492 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SGK494L7N484 410 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SOCS6O14544 535 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RGS16O15492 202 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DLX3O60479 287 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SUPT7LO94864 414 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 AGFG2O95081 481 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OTCP00480 354 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RPS17P08708 135 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF888P0CJ79 500 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SMIM10L1P0DMW3 83 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ACPPP15309 386 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CD22P20273 847 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 GNLYP22749 145 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PIK3CBP42338 1070 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PRKAA2P54646 552 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 EMP2P54851 167 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 AP2B1P63010 937 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ELOAQ14241 798 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DEFB134Q4QY38 66 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 VWA2Q5GFL6 755 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 C10orf62Q5T681 223 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TTC19Q6DKK2 380 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TRIM40Q6P9F5 258 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CHSY3Q70JA7 882 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SRRM1Q8IYB3 904 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DTWD1Q8N5C7 304 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 AMER3Q8N944 861 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 L3MBTL4Q8NA19 623 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR7G3Q8NG95 312 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR51Q1Q8NH59 317 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF483Q8TF39 744 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 GAL3ST3Q96A11 431 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CMTM7Q96FZ5 175 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SMIM10Q96HG1 83 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CENPKQ9BS16 269 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ROGDIQ9GZN7 287 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 REXO4Q9GZR2 422 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LHPPQ9H008 270 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KLHL31Q9H511 634 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SEMA4BQ9NPR2 832 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LUZP4Q9P127 313 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 C3orf18Q9UK00 162 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 STK38LQ9Y2H1 464 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HS3ST3B1Q9Y662 390 aa12.51□□□□□ -0.41
RAB11FIP3-207ENST00000461009 UBR5O95071 2799 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 H0YIV9 168 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ERI3O43414 337 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PLIN3O60664 434 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 GALR3O60755 368 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 BMP10O95393 424 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MLYCDO95822 493 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HPP00738 406 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PROCP04070 461 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HEXBP07686 556 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 UQCRHP07919 91 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CPA3P15088 417 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PTX3P26022 381 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 FOXL2P58012 376 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RAB8AP61006 207 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 BTN3A2P78410 334 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CLCQ05315 142 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KLC1Q07866 573 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF844Q08AG5 666 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ASPHQ12797 758 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HYAL2Q12891 473 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CPSF6Q16630 551 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PLEKHN1Q494U1 663 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TMEM35AQ53FP2 167 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CFAP157Q5JU67 520 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF678Q5SXM1 525 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KIRREL2Q6UWL6 708 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LRIG3Q6UXM1 1119 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZYG11AQ6WRX3 759 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PRSS41Q7RTY9 318 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PARP9Q8IXQ6 854 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PRSS58Q8IYP2 241 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR2L5Q8NG80 312 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MS4A6EQ96DS6 147 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 APOPT1Q96IL0 206 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 THOC3Q96J01 351 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NPLQ9BXD5 320 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 AGPAT4Q9NRZ5 378 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MKS1Q9NXB0 559 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms