RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SRFP11831 508 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 AK4P27144 223 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 BCL6P41182 706 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 FRKP42685 505 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 SRP54P61011 504 aaKnown RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 ADARB1P78563 741 aaKnown RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 C16orf72Q14CZ0 275 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 HEPACAMQ14CZ8 416 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 ALG11Q2TAA5 492 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 ADPRMQ3LIE5 342 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 LRIT3Q3SXY7 679 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 CYBRD1Q53TN4 286 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 TMEM31Q5JXX7 168 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 RNF220Q5VTB9 566 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 ZNF425Q6IV72 752 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 IYDQ6PHW0 289 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 ABI3BPQ7Z7G0 1075 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 AMIGO1Q86WK6 493 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 PLD3Q8IV08 490 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 ZDHHC21Q8IVQ6 265 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 MMP21Q8N119 569 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 FBXL6Q8N531 539 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 TSACCQ96A04 125 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 MYCBPQ99417 103 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 TMEM38AQ9H6F2 299 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 UBE2ZQ9H832 354 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 GPATCH2Q9NW75 528 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 SPHK1Q9NYA1 384 aa11.23□□□□□ -0.61
SMAD3-202ENST00000439724 ZNF624Q9P2J8 865 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 FAF1Q9UNN5 650 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-202ENST00000439724 MYO10Q9HD67 2058 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 SNRNP200O75643 2136 aaKnown RBP11.22□□□□□ -0.61
SMAD3-202ENST00000439724 LRIT2A6NDA9 550 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 PRAMEF26H0Y7S4 382 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 H3BNH8 94 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 MAN2B1O00754 1011 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 GNGT2O14610 69 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 HAT1O14929 419 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 PDPK1O15530 556 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 TMPRSS11DO60235 418 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 RASGRP1O95267 797 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 H6PDO95479 791 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 NTRK1P04629 796 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 IGHV4-34P06331 123 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 CHRM5P08912 532 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-202ENST00000439724 F3P13726 295 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 UQCRC2P22695 453 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 ACTR1BP42025 376 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 RABIFP47224 123 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 DGKEP52429 567 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 ACTR1AP61163 376 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 TFF2Q03403 129 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 EPS8Q12929 822 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 ELOAQ14241 798 aaKnown RBP11.22□□□□□ -0.61
SMAD3-202ENST00000439724 LRRC32Q14392 662 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 LIN52Q52LA3 116 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 OTUD3Q5T2D3 398 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-202ENST00000439724 GCNT6Q5T4J0 391 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 FOXB2Q5VYV0 432 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 KIAA0895LQ68EN5 471 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 OR4C11Q6IEV9 310 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 TRIM40Q6P9F5 258 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 ZNF852Q6ZMS4 543 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 USP51Q70EK9 711 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 RD3Q7Z3Z2 195 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 STK32CQ86UX6 486 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 NAGSQ8N159 534 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 CLEC4FQ8N1N0 589 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 MFSD9Q8NBP5 474 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 PJA1Q8NG27 643 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 CCL4L1Q8NHW4 92 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 CYGBQ8WWM9 190 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 LCN9Q8WX39 176 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 OR5P2Q8WZ92 322 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 DPH7Q9BTV6 452 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 OSBPL10Q9BXB5 764 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 ASPSCR1Q9BZE9 553 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 AICDAQ9GZX7 198 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 TMEM168Q9H0V1 697 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 EPB41L1Q9H4G0 881 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 EPS8L2Q9H6S3 715 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 IL1RAPQ9NPH3 570 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 TAS2R7Q9NYW3 318 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 PNMA8BQ9ULN7 279 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-202ENST00000439724 NDRG2Q9UN36 371 aaKnown RBP11.22□□□□□ -0.61
SMAD3-202ENST00000439724 SNX7Q9UNH6 387 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 DMTF1Q9Y222 760 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 PCDHGA4Q9Y5G9 962 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 DGKBQ9Y6T7 804 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 FANCMQ8IYD8 2048 aa11.22□□□□□ -0.61
SMAD3-202ENST00000439724 CHURC1-FNTBB4DL54 471 aa11.21□□□□□ -0.61
SMAD3-202ENST00000439724 DPM1O60762 260 aa11.21□□□□□ -0.61
SMAD3-202ENST00000439724 SNAP29O95721 258 aa11.21□□□□□ -0.61
SMAD3-202ENST00000439724 CLPTM1O96005 669 aa11.21□□□□□ -0.61
SMAD3-202ENST00000439724 ALBP02768 609 aa11.21□□□□□ -0.61
SMAD3-202ENST00000439724 GNAO1P09471 354 aa11.21□□□□□ -0.61
SMAD3-202ENST00000439724 PABPC4LP0CB38 370 aaKnown RBP11.21□□□□□ -0.61
SMAD3-202ENST00000439724 THRBP10828 461 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms