RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SARGQ9BW04 601 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 SEMA6CQ9H3T2 930 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 BRF2Q9HAW0 419 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 LRTM1Q9HBL6 345 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 PLGRKTQ9HBL7 147 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 PFDN4Q9NQP4 134 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 PILRAQ9UKJ1 303 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 TSC22D4Q9Y3Q8 395 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 KLK4Q9Y5K2 254 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 GVINP1Q7Z2Y8 2422 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 LOC105369274A0A096LPK9 316 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 LOC102723532A0A0G2JNH3 316 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 SH3PXD2BA1X283 911 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 FOXE1O00358 373 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 DUX1O43812 170 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 GDF9O60383 454 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 VPS4BO75351 444 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 RSL1D1O76021 490 aaKnown RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 SORBS2O94875 1100 aaKnown RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 CTSBP07858 339 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 CKMT1AP12532 417 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 ITGAXP20702 1163 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 TGM1P22735 817 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 HRH2P25021 359 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 NBL1P41271 181 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 GRK6P43250 576 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 NME5P56597 212 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 ERVK-8P63133 956 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 GPLD1P80108 840 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 DAB2P98082 770 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 SPIDRQ14159 915 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 DEFB110Q30KQ9 67 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 METTL21CQ5VZV1 264 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 OGFOD2Q6N063 350 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 OR4N4Q8N0Y3 316 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 IFI44Q8TCB0 444 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 CNBD2Q96M20 576 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 OR2A5Q96R48 311 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 F2RL3Q96RI0 385 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 PRPF18Q99633 342 aaKnown RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 NT5DC2Q9H857 520 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 C1orf109Q9NX04 203 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 NCDNQ9UBB6 729 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 RSL24D1Q9UHA3 163 aaKnown RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 DLGAP4Q9Y2H0 992 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 POLR3HQ9Y535 204 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 PCNX2A6NKB5 2137 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 BOLA2-SMG1P6H3BVE0 249 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 NDUFS4O43181 175 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 CBFA2T3O75081 653 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 CD59P13987 128 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 PNLIPP16233 465 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 CCL7P80098 99 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 HYAL2Q12891 473 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 SUZ12Q15022 739 aaKnown RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 SNAP47Q5SQN1 464 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 HPS6Q86YV9 775 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 C19orf47Q8N9M1 422 aaKnown RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 OR9I1Q8NGQ6 314 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 RHBDD1Q8TEB9 315 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 NUDT8Q8WV74 236 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 CMTM5Q96DZ9 223 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 PPP3R2Q96LZ3 170 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 SORBS1Q9BX66 1292 aaKnown RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 MS4A8Q9BY19 250 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 PITHD1Q9GZP4 211 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-202ENST00000414700 RAB33BQ9H082 229 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 KLHL31Q9H511 634 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 C1GALT1Q9NS00 363 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 EPHA6Q9UF33 1036 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 ITGB1BP2Q9UKP3 347 aa14.8□□□□□ -0.04
SHMT2-202ENST00000414700 C4orf51C9J302 202 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 C9JVG2 144 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 H3BSA7 217 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 GBAP04062 536 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 HSD3B1P14060 373 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 PRPH2P23942 346 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 HSD3B2P26439 372 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 CDK9P50750 372 aaKnown RBP14.79□□□□□ -0.04
SHMT2-202ENST00000414700 PSMD7P51665 324 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 MTTPP55157 894 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 RAB15P59190 212 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 ZNF33BQ06732 778 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 IL23RQ5VWK5 629 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 ZNF574Q6ZN55 896 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-202ENST00000414700 ZFAND4Q86XD8 727 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 DEFB107AQ8IZN7 70 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 C1orf52Q8N6N3 182 aaKnown RBP14.79□□□□□ -0.04
SHMT2-202ENST00000414700 MFSD9Q8NBP5 474 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 OR6C4Q8NGE1 309 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 C11orf24Q96F05 449 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-202ENST00000414700 TEX37Q96LM6 180 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 YIPF2Q9BWQ6 316 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 EBPLQ9BY08 206 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 INIPQ9NRY2 104 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 PCDHGB2Q9Y5G2 931 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 AP1M2Q9Y6Q5 423 aa14.79□□□□□ -0.04
SHMT2-202ENST00000414700 FAM186AA6NE01 2351 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 A0A0G2JN53 185 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 TLCD2A6NGC4 264 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms