RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TMEM126BQ8IUX1 230 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 VRK3Q8IV63 474 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 GORASP1Q9BQQ3 440 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 KLHL1Q9NR64 748 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 OBP2AQ9NY56 170 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 TSC22D4Q9Y3Q8 395 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 FAM86C2PA6NEL3 165 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 UQCRC2P22695 453 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 OR1E2P47887 323 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 ARSFP54793 590 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 KAT2AQ92830 837 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 RNFT2Q96EX2 444 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 P2RY12Q9H244 342 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 C11orf16Q9NQ32 467 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 VAPAQ9P0L0 249 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 GPN3Q9UHW5 284 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-202ENST00000377797 GSTK1Q9Y2Q3 226 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 POLR1DQ9Y2S0 133 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 PCDHB14Q9Y5E9 798 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 BTN3A3O00478 584 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 HLA-DQA2P01906 255 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 MATN1P21941 496 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 AK4P27144 223 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-202ENST00000377797 LRP8Q14114 963 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 ZNF311Q5JNZ3 666 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 PLPP6Q8IY26 295 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 ZNF683Q8IZ20 524 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 SLC22A15Q8IZD6 547 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 OR8H2Q8N162 312 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 RNF175Q8N4F7 328 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 LILRA3Q8N6C8 439 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-202ENST00000377797 OR4K14Q8NGD5 310 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 PROKR1Q8TCW9 393 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 HCAR2Q8TDS4 363 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 CDC14AQ9UNH5 594 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 A8MUA0 341 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 GMFGO60234 142 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 CDH15P55291 814 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 LCN8Q6JVE9 175 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 ZNF544Q6NX49 715 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 FAM180BQ6P0A1 224 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 DNMT3AQ9Y6K1 912 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-202ENST00000377797 CLCA3PQ9Y6N3 262 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 C9P02748 559 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 H1F0P07305 194 aaKnown RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 FADDQ13158 208 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 TCTN1Q2MV58 587 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 SPANXN2Q5MJ10 180 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 WDR36Q8NI36 951 aaKnown RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 C16orf78Q8WTQ4 265 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 RPF2Q9H7B2 306 aaKnown RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 CHURC1-FNTBB4DL54 471 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 LSM1O15116 133 aaKnown RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 AGR2O95994 175 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 PRG2P13727 222 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 OXTRP30559 389 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 HYAL2Q12891 473 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 WSCD2Q2TBF2 565 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 Q6ZSR6 202 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 KLHDC8AQ8IYD2 350 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 LYSMD1Q96S90 227 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 INPP5KQ9BT40 448 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 LYARQ9NX58 379 aaKnown RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 ZSCAN32Q9NX65 697 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 DLGAP3O95886 979 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 NR4A1P22736 598 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 RABIFP47224 123 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 XKP51811 444 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 HTRA4P83105 476 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 UAP1L1Q3KQV9 507 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 CYP27C1Q4G0S4 372 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 TMEM35AQ53FP2 167 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 RTL4Q6ZR62 310 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 KCTD8Q6ZWB6 473 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 ZNF761Q86XN6 746 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 RLN3Q8WXF3 142 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 TMEM125Q96AQ2 219 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 TMEM184CQ9NVA4 438 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 OR7A17O14581 309 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 UBXN7O94888 489 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 HK3P52790 923 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 MAPK11Q15759 364 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 ZNF551Q7Z340 670 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 GALNT10Q86SR1 603 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 NRROSQ86YC3 692 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 Q8N9G6 341 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 RBCK1Q9BYM8 510 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 BHLHE41Q9C0J9 482 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-202ENST00000377797 BRF2Q9HAW0 419 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 PLAC1Q9HBJ0 212 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 MS4A12Q9NXJ0 267 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 TVP23BQ9NYZ1 205 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 COPS7AQ9UBW8 275 aa13.91□□□□□ -0.18
TCOF1-202ENST00000377797 ITGB8P26012 769 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 RPS26P62854 115 aaKnown RBP13.9□□□□□ -0.18
TCOF1-202ENST00000377797 DCTN2Q13561 401 aaKnown RBP13.9□□□□□ -0.18
TCOF1-202ENST00000377797 CRB2Q5IJ48 1285 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 TMEM31Q5JXX7 168 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 FBXL20Q96IG2 436 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 DGAT2Q96PD7 388 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms