RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 GKN2Q86XP6 184 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 PTRH1Q86Y79 214 aaKnown RBP20.17■□□□□ 0.82
HLA-C-201ENST00000376228 TRIM48Q8IWZ4 208 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 SDR16C5Q8N3Y7 309 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 DNAJB14Q8TBM8 379 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 IFI44Q8TCB0 444 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ZUFSPQ96AP4 578 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 COQ8BQ96D53 544 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 MYNNQ9NPC7 610 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 SERHLQ9NQF3 203 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 FAM120CQ9NX05 1096 aaKnown RBP20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ATP6V1HQ9UI12 483 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ENTPD2Q9Y5L3 495 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 RP1P56715 2156 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 A0A096LPI6 279 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 BTN3A3O00478 584 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 SCAMP2O15127 329 aaKnown RBP20.17■□□□□ 0.82
HLA-C-201ENST00000376228 HOXB9P17482 250 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-201ENST00000376228 GSTM5P46439 218 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 TRPC1P48995 793 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 SLC34A1Q06495 639 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 LRRC74AQ0VAA2 488 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ILKQ13418 452 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 NR0B2Q15466 257 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ZIC1Q15915 447 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ZFP1Q6P2D0 407 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 IKBIPQ70UQ0 350 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 SFTPA2Q8IWL1 248 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 NAGSQ8N159 534 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 GALNT15Q8N3T1 639 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 AVL9Q8NBF6 648 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 GPR156Q8NFN8 814 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 FLVCR1-AS1Q8TAF5 88 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 CREB3L4Q8TEY5 395 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 MTERF3Q96E29 417 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ANKRD27Q96NW4 1050 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 QRFPRQ96P65 431 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 PRPF18Q99633 342 aaKnown RBP20.17■□□□□ 0.82
HLA-C-201ENST00000376228 SH3GL1Q99961 368 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ANKMY1Q9P2S6 941 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 STOML1Q9UBI4 398 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ADAM29Q9UKF5 820 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 KLK4Q9Y5K2 254 aa20.17■□□□□ 0.82
HLA-C-201ENST00000376228 ACACBO00763 2458 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 ISM1B1AKI9 464 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 H0Y3Z8 333 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 OR1F1O43749 312 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 LCMT2O60294 686 aaKnown RBP20.16■□□□□ 0.82
HLA-C-201ENST00000376228 SCN2BO60939 215 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 HPCAL1P37235 193 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 INSM1Q01101 510 aaPredicted RBP20.16■□□□□ 0.82
HLA-C-201ENST00000376228 RELAQ04206 551 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 GPR18Q14330 331 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 TMEM35AQ53FP2 167 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 RUNDC3AQ59EK9 446 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 C6orf10Q5SRN2 563 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 PAGE2Q7Z2X7 111 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 GOLM1Q8NBJ4 401 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 SLC26A7Q8TE54 656 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 DUS3LQ96G46 650 aaKnown RBP20.16■□□□□ 0.82
HLA-C-201ENST00000376228 DPH7Q9BTV6 452 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 PAIP1Q9H074 479 aaKnown RBP20.16■□□□□ 0.82
HLA-C-201ENST00000376228 AP1M2Q9Y6Q5 423 aa20.16■□□□□ 0.82
HLA-C-201ENST00000376228 TPRP12270 2363 aaKnown RBP20.16■□□□□ 0.82
HLA-C-201ENST00000376228 COL27A1Q8IZC6 1860 aaPredicted RBP20.15■□□□□ 0.82
HLA-C-201ENST00000376228 GNG14A0A1W2PPG7 69 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 FEZF1A0PJY2 475 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 CASC3O15234 703 aaKnown RBP20.15■□□□□ 0.82
HLA-C-201ENST00000376228 KLHL18O94889 574 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 HTR1EP28566 365 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 DUSP3P51452 185 aaPredicted RBP20.15■□□□□ 0.82
HLA-C-201ENST00000376228 WNT3P56703 355 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 PDE7AQ13946 482 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 ADPRMQ3LIE5 342 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 RABL3Q5HYI8 236 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 PERM1Q5SV97 790 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 R3HCC1LQ7Z5L2 792 aaKnown RBP20.15■□□□□ 0.82
HLA-C-201ENST00000376228 FAM156AQ8NDB6 213 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 TRPV3Q8NET8 790 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 SLC37A2Q8TED4 501 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 C16orf78Q8WTQ4 265 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 CENPKQ9BS16 269 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 ZNF717Q9BY31 904 aaPredicted RBP20.15■□□□□ 0.82
HLA-C-201ENST00000376228 ALG2Q9H553 416 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 REEP4Q9H6H4 257 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 VAPAQ9P0L0 249 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 ACTR3BQ9P1U1 418 aa20.15■□□□□ 0.82
HLA-C-201ENST00000376228 MAP1BP46821 2468 aaKnown RBP20.15■□□□□ 0.82
HLA-C-201ENST00000376228 TRBV23OR9-2A0A075B6M9 112 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 GABRR3A8MPY1 467 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 B4DGG1 531 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 PLPP1O14494 284 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 SH3BGRLO75368 114 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 LRATO95237 230 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 C8BP07358 591 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 COX7A2P14406 83 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 ANPEPP15144 967 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 TCN1P20061 433 aaPredicted RBP20.14■□□□□ 0.81
HLA-C-201ENST00000376228 PTPN6P29350 595 aa20.14■□□□□ 0.81
HLA-C-201ENST00000376228 MSX2P35548 267 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms