RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 APMAPQ9HDC9 416 aa12.52□□□□□ -0.4
RAP1A-201ENST00000356415 TXLNGQ9NUQ3 528 aa12.52□□□□□ -0.4
RAP1A-201ENST00000356415 MCM8Q9UJA3 840 aa12.52□□□□□ -0.4
RAP1A-201ENST00000356415 SRPK3Q9UPE1 567 aa12.52□□□□□ -0.4
RAP1A-201ENST00000356415 MRPS2Q9Y399 296 aaKnown RBP12.52□□□□□ -0.4
RAP1A-201ENST00000356415 NAALAD2Q9Y3Q0 740 aa12.52□□□□□ -0.4
RAP1A-201ENST00000356415 RP1P56715 2156 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 A0A0A6YYC8 382 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 I3L1I5 382 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 HYAL3O43820 417 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 B3GALT2O43825 422 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 GALR3O60755 368 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 CCDC22O60826 627 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 EEDO75530 441 aaKnown RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 HBQ1P09105 142 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 G6PDP11413 515 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 PRPS2P11908 318 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 BCKDHAP12694 445 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 IDO1P14902 403 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 ITIH1P19827 911 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 HIST1H1TP22492 207 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 TPP2P29144 1249 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 AVPR1BP47901 424 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 MAPK12P53778 367 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 MAPK10P53779 464 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 STX1BP61266 288 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 RAE1P78406 368 aaKnown RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 DCAF12Q5T6F0 453 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 PWWP2BQ6NUJ5 590 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 CEACAM20Q6UY09 585 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 ZCCHC7Q8N3Z6 543 aaKnown RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 LIX1Q8N485 282 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 ARHGEF39Q8N4T4 335 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 OR9A4Q8NGU2 314 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 CLIP3Q96DZ5 547 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 C11orf24Q96F05 449 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 MARK4Q96L34 752 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 C10orf90Q96M02 699 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 TEFMQ96QE5 360 aaKnown RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 ZNF717Q9BY31 904 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 ACTR5Q9H9F9 607 aaPredicted RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 LHX9Q9NQ69 397 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 DHCR7Q9UBM7 475 aaKnown RBP12.52□□□□□ -0.41
RAP1A-201ENST00000356415 PISDQ9UG56 409 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 CDC14AQ9UNH5 594 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 DLGAP4Q9Y2H0 992 aa12.52□□□□□ -0.41
RAP1A-201ENST00000356415 FAM149AA5PLN7 773 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 C4orf51C9J302 202 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 KLHL18O94889 574 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 NTRK1P04629 796 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 ALDOCP09972 364 aaKnown RBP12.51□□□□□ -0.41
RAP1A-201ENST00000356415 ACPPP15309 386 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 PCSK2P16519 638 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 CERS1P27544 350 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 RAB15P59190 212 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 SLAMF1Q13291 335 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 GSTA3Q16772 222 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 C3orf38Q5JPI3 329 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 TMEM164Q5U3C3 297 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 ZNF793Q6ZN11 406 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 MTDHQ86UE4 582 aaKnown RBP12.51□□□□□ -0.41
RAP1A-201ENST00000356415 FAM9CQ8IZT9 166 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 CDC26Q8NHZ8 85 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 MMABQ96EY8 250 aaPredicted RBP12.51□□□□□ -0.41
RAP1A-201ENST00000356415 TSSK3Q96PN8 268 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 TAAR9Q96RI9 348 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 ASPSCR1Q9BZE9 553 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 AIG1Q9NVV5 245 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 ASIC5Q9NY37 505 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 DLL3Q9NYJ7 618 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 BAIAP2L1Q9UHR4 511 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 PCDHB3Q9Y5E6 796 aa12.51□□□□□ -0.41
RAP1A-201ENST00000356415 PCM1Q15154 2024 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 A0A0A6YYD5 115 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 ZNF860A6NHJ4 632 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 SGK494L7N484 410 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 FOXS1O43638 330 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 DCTN3O75935 186 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 MED26O95402 600 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 TIAF1O95411 115 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 NSA2O95478 260 aaKnown RBP12.5□□□□□ -0.41
RAP1A-201ENST00000356415 FAM58BPP0C7Q3 252 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 SDC1P18827 310 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 SNRPNP63162 240 aaKnown RBP12.5□□□□□ -0.41
RAP1A-201ENST00000356415 IRX1P78414 480 aaPredicted RBP12.5□□□□□ -0.41
RAP1A-201ENST00000356415 ZNF763Q0D2J5 394 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 RHBDD2Q6NTF9 364 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 PRSS41Q7RTY9 318 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 PDSS2Q86YH6 399 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 TMEM132CQ8N3T6 1108 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 METTL27Q8N6F8 245 aaPredicted RBP12.5□□□□□ -0.41
RAP1A-201ENST00000356415 AMER3Q8N944 861 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 MVB12AQ96EY5 273 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 LRRC37BQ96QE4 947 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 ZPBPQ9BS86 351 aa12.5□□□□□ -0.41
RAP1A-201ENST00000356415 MRGBPQ9NV56 204 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms