RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 IL12RB2Q99665 862 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ZNF649Q9BS31 505 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 THAP7Q9BT49 309 aaPredicted RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 TFB2MQ9H5Q4 396 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 CNOT2Q9NZN8 540 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 MYEF2Q9P2K5 600 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 SEC14L3Q9UDX4 400 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 TRPS1Q9UHF7 1281 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 FADS1O60427 444 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 GGT1P19440 569 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 MAOAP21397 527 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 MAPK3P27361 379 aaPredicted RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 GLUD2P49448 558 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 GPLD1P80108 840 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 GFOD2Q3B7J2 385 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 TAPT1Q6NXT6 567 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 SCIMPQ6UWF3 145 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 LRRC28Q86X40 367 aaPredicted RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 CAMKVQ8NCB2 501 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 STYXQ8WUJ0 223 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 PARK7Q99497 189 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 CCDC86Q9H6F5 360 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 ZFP57Q9NU63 452 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 PRR36Q9H6K5 1346 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 BORCS7-ASMTA0A0B4J1R7 106 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ANXA2P2A6NMY6 339 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 LEUTXA8MZ59 168 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 C9JVG2 144 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 CYTIPO60759 359 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ALDH2P05091 517 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ANXA2P07355 339 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 STSP08842 583 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ICAM3P32942 547 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 TMEM132BQ14DG7 1078 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 LBHQ53QV2 105 aaPredicted RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 CERCAMQ5T4B2 595 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 UQCC3Q6UW78 93 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 WASH2PQ6VEQ5 465 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 MAMSTRQ6ZN01 415 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 FAM183BPQ6ZVS7 135 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 GAREM2Q75VX8 874 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ACOT1Q86TX2 421 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 LINC00518Q8N0U6 118 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 REPS2Q8NFH8 660 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 THRSPQ92748 146 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 RELTQ969Z4 430 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 RBM14Q96PK6 669 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 NDC1Q9BTX1 674 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 STRA6Q9BX79 667 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ARHGAP39Q9C0H5 1083 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 BHLHE41Q9C0J9 482 aaPredicted RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 MUC3BQ9H195 1237 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ARL15Q9NXU5 204 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 NOSIPQ9Y314 301 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 GTF3C1Q12789 2109 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 UBFD1O14562 309 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 RDH16O75452 317 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 TRBC1P01850 177 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 GOT1P17174 413 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 CSKP41240 450 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 FKBP1BP68106 108 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 PDZK1IP1Q13113 114 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 UBAP2Q5T6F2 1119 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 FCRLBQ6BAA4 426 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 IL17RDQ8NFM7 739 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 OR2L2Q8NH16 312 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 MARC2Q969Z3 335 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 SLC41A3Q96GZ6 507 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 IL4I1Q96RQ9 567 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ZNF768Q9H5H4 540 aaKnown RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 SCUBE2Q9NQ36 999 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ZNF358Q9NW07 568 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 OSGIN1Q9UJX0 560 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 ICKQ9UPZ9 632 aa4.87□□□□□ -1.63
SKP1-202ENST00000353411 N4BP2Q86UW6 1770 aaPredicted RBP4.87□□□□□ -1.63
SKP1-202ENST00000353411 GXYLT2A0PJZ3 443 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ZNF705GA8MUZ8 300 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 ZNF487B1APH4 448 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TMEM233B4DJY2 109 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 FFAR3O14843 346 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GPR42O15529 346 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 KERAO60938 352 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ADH1AP07327 375 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 POU2F1P14859 743 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ARF3P61204 181 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 ARF1P84077 181 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 YIF1BQ5BJH7 314 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ZNF730Q6ZMV8 503 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GLT6D1Q7Z4J2 308 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 DTX3Q8N9I9 347 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 OR5T1Q8NG75 326 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ZDHHC1Q8WTX9 485 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TMEM74Q96NL1 305 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PTCHD1Q96NR3 888 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SEC22CQ9BRL7 303 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ACSS2Q9NR19 701 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TVP23BQ9NYZ1 205 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC27A6Q9Y2P4 619 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 DOCK8Q8NF50 2099 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 LOC100509620A0A075B734 347 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms