RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 RNF4P78317 190 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 PROX2Q3B8N5 592 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 INTS6LQ5JSJ4 861 aaKnown RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 EEF1DP3Q658K8 133 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 TMEM88Q6PEY1 159 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 CCDC117Q8IWD4 279 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 ADHFE1Q8IWW8 467 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 PGBD3Q8N328 593 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 STX19Q8N4C7 294 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 C12orf29Q8N999 325 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 TTC29Q8NA56 475 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 RHBDF1Q96CC6 855 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 NARS2Q96I59 477 aaKnown RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 SLC38A3Q99624 504 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 LRRC3Q9BY71 257 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 B3GNT5Q9BYG0 378 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 NKX6-2Q9C056 277 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 BRD9Q9H8M2 597 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 EVA1AQ9H8M9 152 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 SLC28A3Q9HAS3 691 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 EMC7Q9NPA0 242 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 UFSP2Q9NUQ7 469 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 THSD7BQ9C0I4 1608 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 IGKV6-21A0A0C4DH24 114 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 TERTO14746 1132 aaKnown RBP11.4□□□□□ -0.58
SHMT2-201ENST00000328923 FFAR3O14843 346 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 GPR42O15529 346 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 IL6P05231 212 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 URODP06132 367 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 SYPP08247 313 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 FBP1P09467 338 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 CNPP09543 421 aaKnown RBP11.4□□□□□ -0.58
SHMT2-201ENST00000328923 PRKAR1AP10644 381 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 ANXA3P12429 323 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 APEX1P27695 318 aaKnown RBP11.4□□□□□ -0.58
SHMT2-201ENST00000328923 HOXA6P31267 233 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 NUDT6P53370 316 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 DIO3P55073 304 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 EMX2Q04743 252 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 DOC2BQ14184 412 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 SEC23BQ15437 767 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 KYAT1Q16773 422 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 EXOC3L2Q2M3D2 409 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 SOWAHAQ2M3V2 549 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 TRIQKQ629K1 86 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 LRRC66Q68CR7 880 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 LRRC8DQ7L1W4 858 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 DET1Q7L5Y6 550 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 MFSD6LQ8IWD5 586 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 C12orf45Q8N5I9 185 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-201ENST00000328923 COQ8AQ8NI60 647 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 SETD7Q8WTS6 366 aaKnown RBP11.4□□□□□ -0.58
SHMT2-201ENST00000328923 PHF21BQ96EK2 531 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 L3HYPDHQ96EM0 354 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 CMTM3Q96MX0 182 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 MAP3K3Q99759 626 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 GSTO2Q9H4Y5 243 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 MROH8Q9H579 483 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 EQTNQ9NQ60 294 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 RGS18Q9NS28 235 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 OLA1Q9NTK5 396 aaKnown RBP11.4□□□□□ -0.58
SHMT2-201ENST00000328923 MYEF2Q9P2K5 600 aaKnown RBP11.4□□□□□ -0.58
SHMT2-201ENST00000328923 PSORS1C1Q9UIG5 152 aa11.4□□□□□ -0.58
SHMT2-201ENST00000328923 ZNF638Q14966 1978 aaKnown RBP11.4□□□□□ -0.58
SHMT2-201ENST00000328923 A0A1W2PQL4 384 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-201ENST00000328923 C2orf74A8MZ97 194 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 AIPO00170 330 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 KCNK1O00180 336 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 BEST1O76090 585 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 NDUFB7P17568 137 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 GGT1P19440 569 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 PBX3P40426 434 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 MATKP42679 507 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 RORCP51449 518 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 PRMT2P55345 433 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 MXD1Q05195 221 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 SLC25A52Q3SY17 297 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 USP39Q53GS9 565 aaKnown RBP11.4□□□□□ -0.59
SHMT2-201ENST00000328923 BCL2L15Q5TBC7 163 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 ZER1Q7Z7L7 766 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 ATCAYQ86WG3 371 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 TMEM192Q8IY95 271 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 ASZ1Q8WWH4 475 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 UCN3Q969E3 161 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 PABPC5Q96DU9 382 aaKnown RBP11.4□□□□□ -0.59
SHMT2-201ENST00000328923 MRPS24Q96EL2 167 aaKnown RBP11.4□□□□□ -0.59
SHMT2-201ENST00000328923 CPEB1Q9BZB8 566 aaKnown RBP11.4□□□□□ -0.59
SHMT2-201ENST00000328923 SDR39U1Q9NRG7 319 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-201ENST00000328923 GPR83Q9NYM4 423 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 SEC14L4Q9UDX3 406 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF451Q9Y4E5 1061 aa11.4□□□□□ -0.59
SHMT2-201ENST00000328923 TEX13CA0A0J9YWL9 993 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 VEGFDO43915 354 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 CREG1O75629 220 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 DHFRP00374 187 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 STAG3L1P0CL83 205 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 SLC2A2P11168 524 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-201ENST00000328923 ERCC2P18074 760 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 RHCEP18577 417 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms