RNA–Protein interactions for RNA: ENST00000639002.1

CD44-239, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-239ENST00000639002 TAZQ16635 292 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 WDR78Q5VTH9 848 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 COX8CQ7Z4L0 72 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 SERINC5Q86VE9 423 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 CERS3Q8IU89 383 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 PRSS35Q8N3Z0 413 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 FLVCR1-AS1Q8TAF5 88 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 CD99L2Q8TCZ2 262 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 EXT2Q93063 718 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 RANBP9Q96S59 729 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 POLR3GLQ9BT43 218 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 IARS2Q9NSE4 1012 aaKnown RBP2.93□□□□□ -1.94
CD44-239ENST00000639002 COLEC10Q9Y6Z7 277 aa2.93□□□□□ -1.94
CD44-239ENST00000639002 FAM220BPB1ANY3 271 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 CDX4O14627 284 aaPredicted RBP2.92□□□□□ -1.94
CD44-239ENST00000639002 ADRB2P07550 413 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 QDPRP09417 244 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 ANPEPP15144 967 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 FCGR2BP31994 310 aaPredicted RBP2.92□□□□□ -1.94
CD44-239ENST00000639002 FCGR2CP31995 323 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 CRYBA2P53672 197 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 IGLV3-21P80748 117 aaPredicted RBP2.92□□□□□ -1.94
CD44-239ENST00000639002 RFTN1Q14699 578 aaPredicted RBP2.92□□□□□ -1.94
CD44-239ENST00000639002 ZNF79Q15937 498 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 RSBN1Q5VWQ0 802 aaPredicted RBP2.92□□□□□ -1.94
CD44-239ENST00000639002 OLFML2AQ68BL7 652 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 FUT10Q6P4F1 479 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 PI4KAP1Q8N8J0 262 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 HDAC11Q96DB2 347 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 ZNF558Q96NG5 402 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 MGME1Q9BQP7 344 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 DEPPQ9NTK1 212 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 DHRS4-AS1Q9P1J3 65 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 Q9UF83 564 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 AGTPBP1Q9UPW5 1226 aa2.92□□□□□ -1.94
CD44-239ENST00000639002 ZNF253O75346 499 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 WDHD1O75717 1129 aaPredicted RBP2.91□□□□□ -1.94
CD44-239ENST00000639002 FYNP06241 537 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 EPORP19235 508 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 ACAT1P24752 427 aaKnown RBP2.91□□□□□ -1.94
CD44-239ENST00000639002 MATKP42679 507 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 GMPSP49915 693 aaPredicted RBP2.91□□□□□ -1.94
CD44-239ENST00000639002 SULT2A1Q06520 285 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 GCKRQ14397 625 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 LTB4RQ15722 352 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 LBHQ53QV2 105 aaPredicted RBP2.91□□□□□ -1.94
CD44-239ENST00000639002 PAMR1Q6UXH9 720 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 TRMT11Q7Z4G4 463 aaKnown RBP2.91□□□□□ -1.94
CD44-239ENST00000639002 PRPF39Q86UA1 669 aaKnown RBP2.91□□□□□ -1.94
CD44-239ENST00000639002 AMIGO1Q86WK6 493 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 LRRC49Q8IUZ0 686 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 FAM219AQ8IW50 185 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 OR6T1Q8NGN1 323 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 KIAA1524Q8TCG1 905 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 NUS1Q96E22 293 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 ALKBH3Q96Q83 286 aaPredicted RBP2.91□□□□□ -1.94
CD44-239ENST00000639002 ALKBH7Q9BT30 221 aaPredicted RBP2.91□□□□□ -1.94
CD44-239ENST00000639002 SLC39A8Q9C0K1 460 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 SNX25Q9H3E2 840 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 FN3KQ9H479 309 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 THYN1Q9P016 225 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 SLC12A6Q9UHW9 1150 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 SATB2Q9UPW6 733 aa2.91□□□□□ -1.94
CD44-239ENST00000639002 STARD3NLO95772 234 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 MYL6BP14649 208 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 CPT2P23786 658 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 CAPZA2P47755 286 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 RGS7P49802 495 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 EVCP57679 992 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 GRB14Q14449 540 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 TIMM50Q3ZCQ8 353 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 LRRC37A5PQ49AS3 106 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 GPR139Q6DWJ6 353 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 MOXD1Q6UVY6 613 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 ENPP7Q6UWV6 458 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 NRARPQ7Z6K4 114 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 CCDC185Q8N715 623 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 OR1B1Q8NGR6 318 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 PGAP3Q96FM1 320 aaPredicted RBP2.9□□□□□ -1.95
CD44-239ENST00000639002 C5orf66Q9H5L9 145 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 C3orf14Q9HBI5 128 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 EXOC1Q9NV70 894 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 FAM205AQ6ZU69 1335 aa2.9□□□□□ -1.95
CD44-239ENST00000639002 TRAV18A0A075B6X5 111 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 URADA6NGE7 173 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 PRSS46E5RG02 174 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 SRPX2O60687 465 aaPredicted RBP2.89□□□□□ -1.95
CD44-239ENST00000639002 DIAPH2O60879 1101 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 ANGPTL1O95841 491 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 IGHG3P01860 377 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 IL11P20809 199 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 MFAP3P55082 362 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 ZNF542PQ5EBM4 170 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 BTNL8Q6UX41 500 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 TMEM64Q6YI46 380 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 BRINP3Q76B58 766 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 ENOSF1Q7L5Y1 443 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 MFN1Q8IWA4 741 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 ZNRF1Q8ND25 227 aa2.89□□□□□ -1.95
CD44-239ENST00000639002 CFAP57Q96MR6 1250 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms