RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 GALNT1Q10472 559 aaPredicted RBP10.07□□□□□ -0.8
VPS11-208ENST00000621676 SPESP1Q6UW49 350 aa10.07□□□□□ -0.8
VPS11-208ENST00000621676 DLEU7Q6UYE1 221 aa10.07□□□□□ -0.8
VPS11-208ENST00000621676 KBTBD6Q86V97 674 aa10.07□□□□□ -0.8
VPS11-208ENST00000621676 MICU2Q8IYU8 434 aa10.07□□□□□ -0.8
VPS11-208ENST00000621676 SMPDL3AQ92484 453 aa10.07□□□□□ -0.8
VPS11-208ENST00000621676 AIF1LQ9BQI0 150 aa10.07□□□□□ -0.8
VPS11-208ENST00000621676 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
VPS11-208ENST00000621676 RAD18Q9NS91 495 aa10.07□□□□□ -0.8
VPS11-208ENST00000621676 ACACAQ13085 2346 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 QSOX1O00391 747 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 B4GALT2O60909 372 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 CTSVO60911 334 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 TCF3P15923 654 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 TCEA1P23193 301 aaKnown RBP10.06□□□□□ -0.8
VPS11-208ENST00000621676 EIF2DP41214 584 aaKnown RBP10.06□□□□□ -0.8
VPS11-208ENST00000621676 LSSP48449 732 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 CCR8P51685 355 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 SLAMF1Q13291 335 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 GSTA3Q16772 222 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 TCEAL6Q6IPX3 200 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 ADAMTSL4Q6UY14 1074 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 VN1R5Q7Z5H4 357 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 MSRB3Q8IXL7 192 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 OR56A3Q8NH54 315 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 TCEAL3Q969E4 200 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 CHID1Q9BWS9 393 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 FAM60AQ9NP50 221 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 STX18Q9P2W9 335 aaKnown RBP10.06□□□□□ -0.8
VPS11-208ENST00000621676 CPNE7Q9UBL6 633 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 TRPS1Q9UHF7 1281 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 ANGPTL2Q9UKU9 493 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 GPR34Q9UPC5 381 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 ATG4BQ9Y4P1 393 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 COL4A4P53420 1690 aaPredicted RBP10.06□□□□□ -0.8
VPS11-208ENST00000621676 PCDH15Q96QU1 1955 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 EVPLLA8MZ36 301 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 CYP7B1O75881 506 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 GNAO1P09471 354 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 NFATC4Q14934 902 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 SMAD2Q15796 467 aaKnown RBP10.06□□□□□ -0.8
VPS11-208ENST00000621676 TOR1AIP1Q5JTV8 583 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 C1orf189Q5VU69 101 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 KLHDC8AQ8IYD2 350 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 WDR20Q8TBZ3 569 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 SLC38A3Q99624 504 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 C8orf33Q9H7E9 229 aaPredicted RBP10.06□□□□□ -0.8
VPS11-208ENST00000621676 TPT1P8Q9HAU6 139 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 DMRT3Q9NQL9 472 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 HCN3Q9P1Z3 774 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 FZD4Q9ULV1 537 aa10.06□□□□□ -0.8
VPS11-208ENST00000621676 SLC9B1P1A6NJY1 282 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 H3BNX3 289 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 SGK494L7N484 410 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 HNRNPCL1O60812 293 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 PEBP1P30086 187 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 CSNK1G2P78368 415 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 RAE1P78406 368 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 CDKL1Q00532 357 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 PWP1Q13610 501 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 PAGE2BQ5JRK9 111 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 EFL1Q7Z2Z2 1120 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 MAGEC3Q8TD91 643 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 USP7Q93009 1102 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 TEFMQ96QE5 360 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 MAP3K3Q99759 626 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ARMC7Q9H6L4 198 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 AMBNQ9NP70 447 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 WSB2Q9NYS7 404 aaPredicted RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 KCNE1BA0A087WTH5 132 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 A0A1W2PPV9 198 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 PLOD2O00469 737 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ACOT8O14734 319 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ANKRD28O15084 1053 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 NTN1O95631 604 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 CDH15P55291 814 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 MRPS21P82921 87 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 LASP1Q14847 261 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 KRT78Q8N1N4 520 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 SLC9A6Q92581 669 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ANKRD27Q96NW4 1050 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 BBS4Q96RK4 519 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 MESP1Q9BRJ9 268 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 LIN28AQ9H9Z2 209 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 SLC6A20Q9NP91 592 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ITM2CQ9NQX7 267 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 SPTAN1Q13813 2472 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 NPIPA5A0A0B4J1W7 369 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 FAM86C2PA6NEL3 165 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 NPIPA7E9PJI5 369 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 M0R129 80 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 SOCS2O14508 198 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 TNFP01375 233 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ZNF888P0CJ79 500 aaPredicted RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 NPIPA8P0DM63 369 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ST6GAL1P15907 406 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 PSMA4P25789 261 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 PPP2R1BP30154 601 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 PEX19P40855 299 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms