RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 OR4C11Q6IEV9 310 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 PWWP2BQ6NUJ5 590 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 TLDC1Q6P9B6 456 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 ABHD17CQ6PCB6 329 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 ZNF793Q6ZN11 406 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 TMPRSS7Q7RTY8 843 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 PRSS41Q7RTY9 318 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 CPLX4Q7Z7G2 160 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 BPHLQ86WA6 291 aaPredicted RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 PDSS2Q86YH6 399 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 GPR135Q8IZ08 494 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 METTL4Q8N3J2 472 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 C1orf52Q8N6N3 182 aaKnown RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 AMER3Q8N944 861 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 ZCCHC10Q8TBK6 192 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 ACTRT2Q8TDY3 377 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 GAL3ST3Q96A11 431 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 RNF31Q96EP0 1072 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 C11orf24Q96F05 449 aaPredicted RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 QRFPRQ96P65 431 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 TEFMQ96QE5 360 aaKnown RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 C17orf62Q9BQA9 187 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 LRTM1Q9HBL6 345 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 RIC8BQ9NVN3 520 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 NMRK1Q9NWW6 199 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 IRAK4Q9NWZ3 460 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 C1orf109Q9NX04 203 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 AKAP7Q9P0M2 348 aaPredicted RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 KLHL14Q9P2G3 628 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 SLC22A7Q9Y694 548 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 URADA6NGE7 173 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 PLD2O14939 933 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 FOXS1O43638 330 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 SNX3O60493 162 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 DNAJB6O75190 326 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 VPS4BO75351 444 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 EEDO75530 441 aaKnown RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 FAM107AO95990 144 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 GBAP04062 536 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 JMJD7P0C870 316 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 ALOX12P18054 663 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 IL1RNP18510 177 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 ATP5A1P25705 553 aaKnown RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 RAP1GDS1P52306 607 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 MAPK10P53779 464 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 BTN3A2P78410 334 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 ACSM2AQ08AH3 577 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 EIF3IQ13347 325 aaKnown RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 FAM53BQ14153 422 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 PUM1Q14671 1186 aaKnown RBP eCLIP9.05□□□□□ -0.96
RFFL-210ENST00000582308 MUM1Q2TAK8 710 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 FAM214AQ32MH5 1076 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 LSM12Q3MHD2 195 aaKnown RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.05□□□□□ -0.96
RFFL-210ENST00000582308 DEFB134Q4QY38 66 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 ATP6AP1LQ52LC2 224 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 C3orf38Q5JPI3 329 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 YOD1Q5VVQ6 348 aaPredicted RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 GARNL3Q5VVW2 1013 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 ACSM2BQ68CK6 577 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 NXNQ6DKJ4 435 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 TRIM40Q6P9F5 258 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 ABHD13Q7L211 337 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 COMMD6Q7Z4G1 85 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 SPATA21Q7Z572 469 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 PIGWQ7Z7B1 504 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 ZFAND4Q86XD8 727 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 PPP1R3BQ86XI6 285 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 GALNT15Q8N3T1 639 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 TTC29Q8NA56 475 aaPredicted RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 SLC38A9Q8NBW4 561 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 OR9A4Q8NGU2 314 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 WDR36Q8NI36 951 aaKnown RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 C10orf82Q8WW14 230 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 STON2Q8WXE9 905 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 METTL2AQ96IZ6 378 aaKnown RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 FCRL1Q96LA6 429 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 PPP3R2Q96LZ3 170 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 KCNC2Q96PR1 638 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 TAAR9Q96RI9 348 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 SIKE1Q9BRV8 207 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 CENPKQ9BS16 269 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 TBCDQ9BTW9 1192 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 TMEM120AQ9BXJ8 343 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 NSRP1Q9H0G5 558 aaKnown RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 DDX31Q9H8H2 851 aaKnown RBP9.05□□□□□ -0.96
RFFL-210ENST00000582308 TCF7L2Q9NQB0 619 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 CUTCQ9NTM9 273 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 SIRT5Q9NXA8 310 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 AHSPQ9NZD4 102 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 PISDQ9UG56 409 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 SATB2Q9UPW6 733 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 DLGAP4Q9Y2H0 992 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 B3GALT1Q9Y5Z6 326 aa9.05□□□□□ -0.96
RFFL-210ENST00000582308 AKAP13Q12802 2813 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 NUP210LQ5VU65 1888 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 A0A0A6YYC8 382 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 A0A0A6YYD5 115 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ZNF860A6NHJ4 632 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 C9orf172C9J069 976 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms