RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 ACAD11Q709F0 780 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 CD163Q86VB7 1156 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 PPIL6Q8IXY8 311 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 OR56A3Q8NH54 315 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 RND1Q92730 232 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 FBXL8Q96CD0 374 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 FAR2Q96K12 515 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 NDNQ99608 321 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 PELI2Q9HAT8 420 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 FBXW2Q9UKT8 454 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 SH2B3Q9UQQ2 575 aa13.3□□□□□ -0.28
SMARCD2-205ENST00000577686 TRBV11-1A0A0K0K1C0 115 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 TCRBV16S1A1N1A0A5B0 115 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 CLDN4O14493 209 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 PEX1O43933 1283 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 MAN1A2O60476 641 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 TUBB4AP04350 444 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 CXCR5P32302 372 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 MAGEA3P43357 314 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 SCTRP47872 440 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 SSR4P51571 173 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 OLR1P78380 273 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 HSF1Q00613 529 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 CRYMQ14894 314 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 SPANXN3Q5MJ09 141 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 PAQR3Q6TCH7 311 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 RGS9BPQ6ZS82 235 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 ARMC10Q8N2F6 343 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 KIF2BQ8N4N8 673 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 B3GNT7Q8NFL0 401 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 MYRIPQ8NFW9 859 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 TTLQ8NG68 377 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 VMP1Q96GC9 406 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 PBKQ96KB5 322 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 RHBGQ9H310 441 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 KCNJ16Q9NPI9 418 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 ERVK-11Q9UQG0 969 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 ASB1Q9Y576 335 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 KCNE2Q9Y6J6 123 aa13.29□□□□□ -0.28
SMARCD2-205ENST00000577686 HEATR5BQ9P2D3 2071 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 A0A1B0GTH9 108 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 H2AFYO75367 372 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 SERPINA6P08185 405 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 TFEBP19484 476 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 GSTM2P28161 218 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 PTGER1P34995 402 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 SNRPNP63162 240 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 REEP5Q00765 189 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 PLGLB1Q02325 96 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 RBBP5Q15291 538 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 PPP1R7Q15435 360 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 HECTD2Q5U5R9 776 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 ZNF468Q5VIY5 522 aaPredicted RBP13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 CES4AQ5XG92 561 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 FAM45BPQ6NSW5 357 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 C3P1Q6ZMU1 363 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 GALNT7Q86SF2 657 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 CLYBLQ8N0X4 340 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 C7orf57Q8NEG2 295 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 C16orf52Q8NHV5 167 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 FAM45AQ8TCE6 357 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 UTP15Q8TED0 518 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 PYCR2Q96C36 320 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 SIGLEC10Q96LC7 697 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 ZNF559Q9BR84 538 aa13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 YARS2Q9Y2Z4 477 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-205ENST00000577686 A8MVJ9 347 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 PGRMC1O00264 195 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 ZFAND5O76080 213 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 MYO1DO94832 1006 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 GUCA1CO95843 209 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 F7P08709 466 aaPredicted RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 MAOAP21397 527 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 FNTAP49354 379 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 ST13P50502 369 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 HSD17B7P56937 341 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 RAB8AP61006 207 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 TTC27Q6P3X3 843 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 CEP128Q6ZU80 1094 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 NCCRP1Q6ZVX7 275 aaPredicted RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 TMPRSS11BQ86T26 416 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 SULF2Q8IWU5 870 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 NAT8LQ8N9F0 302 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 ZFP62Q8NB50 900 aaPredicted RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 ACBD4Q8NC06 268 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 CREB3L4Q8TEY5 395 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 NEIL2Q969S2 332 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 GAL3ST3Q96A11 431 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 SEC16BQ96JE7 1060 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 TREX2Q9BQ50 279 aaPredicted RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 NPLQ9BXD5 320 aaPredicted RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 SLC6A16Q9GZN6 736 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 PPANQ9NQ55 473 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 HPF1Q9NWY4 346 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 ZFATQ9P243 1243 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 SCN2AQ99250 2005 aa13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 NCOA6Q14686 2063 aaPredicted RBP13.27□□□□□ -0.29
SMARCD2-205ENST00000577686 IGKV3D-11A0A0A0MRZ8 115 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms