RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 AICDAQ9GZX7 198 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF552Q9H707 407 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 PSMC3IPQ9P2W1 217 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 LOC102723996A0A087X1L8 192 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 NSG1A0A0A6YYJ2 146 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 A0A1W2PQ72 361 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 DPM1O60762 260 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 SMIM24O75264 130 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 B3GALT4O96024 378 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 ALPPP05187 535 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 C8orf89P0DMQ9 161 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 COX6A1P12074 109 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 PLA2G2AP14555 144 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 PIK3CGP48736 1102 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 RAPSNQ13702 412 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 GTF2H2Q13888 395 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 ADPRMQ3LIE5 342 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 VWA5B1Q5TIE3 1220 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 IRAK1BP1Q5VVH5 260 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 LIPJQ5W064 366 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 GTF2H2CQ6P1K8 395 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 MED27Q6P2C8 311 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 VN1R5Q7Z5H4 357 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 LCA5Q86VQ0 697 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 PARP9Q8IXQ6 854 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 LAS2Q8IYD9 372 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 SHISA5Q8N114 240 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 PLPP5Q8NEB5 264 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 MS4A6EQ96DS6 147 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 PHF21BQ96EK2 531 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 FAR2Q96K12 515 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 MESP1Q9BRJ9 268 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 REXO4Q9GZR2 422 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 MRPL46Q9H2W6 279 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 XPR1Q9UBH6 696 aa13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 C19orf25Q9UFG5 118 aaPredicted RBP13.04□□□□□ -0.32
HERPUD1-218ENST00000569569 A0A088AWK7 358 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 IGHV1-45A0A0A0MS14 117 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 LRRC14BA6NHZ5 514 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 STX16-NPEPL1H3BU86 382 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 E2F3O00716 465 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 STX16O14662 325 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 ERI3O43414 337 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 UGDHO60701 494 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 DNAJB6O75190 326 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 SIX3O95343 332 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 TBX6O95947 436 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 FHP07954 510 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF10P21506 573 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 JAK1P23458 1154 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 SERPINB1P30740 379 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 HNRNPH1P31943 449 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 CASRP41180 1078 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 EFNA3P52797 238 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 OLR1P78380 273 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 BTN3A2P78410 334 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 GRHL2Q6ISB3 625 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 TRIM40Q6P9F5 258 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 GOLGA7Q7Z5G4 137 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 PTGR2Q8N8N7 351 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 OR2L5Q8NG80 312 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 ACMSDQ8TDX5 336 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF473Q8WTR7 871 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 TBC1D20Q96BZ9 403 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 NPLQ9BXD5 320 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 LHPPQ9H008 270 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 IPPKQ9H8X2 491 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 PPCSQ9HAB8 311 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF160Q9HCG1 818 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 LANCL2Q9NS86 450 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 RIC8BQ9NVN3 520 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 TBK1Q9UHD2 729 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 ADGRE2Q9UHX3 823 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 CPAMD8Q8IZJ3 1885 aa13.03□□□□□ -0.32
HERPUD1-218ENST00000569569 NBASA2RRP1 2371 aa13.02□□□□□ -0.32
HERPUD1-218ENST00000569569 OR2W5A6NFC9 320 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 C4orf51C9J302 202 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 CDC123O75794 336 aaPredicted RBP13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 SHBGP04278 402 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 PCNAP12004 261 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 RNH1P13489 461 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 ICAM2P13598 275 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 EEF1DP29692 281 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 PLA2G16P53816 162 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 RHAGQ02094 409 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 EEF1A2Q05639 463 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 TGM3Q08188 693 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 Q0VFX4 171 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 PCOLCEQ15113 449 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 AGAP7PQ5VUJ5 663 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 ADNP2Q6IQ32 1131 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 IGFL3Q6UXB1 125 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 CPEB2Q7Z5Q1 589 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 KBTBD2Q8IY47 623 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 CA13Q8N1Q1 262 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 TMEM151AQ8N4L1 468 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 SRFBP1Q8NEF9 429 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 OR7G3Q8NG95 312 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 AGAP4Q96P64 663 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms