RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 SLC35G6P0C7Q6 338 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 SKIV2L2P42285 1042 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 NPY2RP49146 381 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 HLCSP50747 726 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 WNT3P56703 355 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 PLGLB1Q02325 96 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 DHX34Q14147 1143 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 KRTAP21-3Q3LHN1 58 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 TTLL9Q3SXZ7 439 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 RNF187Q5TA31 235 aaPredicted RBP10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 AGTRAPQ6RW13 159 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 CLNKQ7Z7G1 428 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 SYCE1Q8N0S2 351 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 TMEM156Q8N614 296 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 MFSD9Q8NBP5 474 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 PLPP5Q8NEB5 264 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 LILRB4Q8NHJ6 448 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 PEX13Q92968 403 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 ALKBH4Q9NXW9 302 aa10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 ZNF223Q9UK11 482 aaPredicted RBP10.9□□□□□ -0.66
NSMCE1-202ENST00000561960 FCHO1O14526 889 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 GUCA1CO95843 209 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 MPC1LP0DKB6 136 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 DRD2P14416 443 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 OGNP20774 298 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 HSD17B2P37059 387 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 ADH7P40394 386 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 ZNF75DP51815 510 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 HNRNPFP52597 415 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 PPIAP62937 165 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 PPP2R2AP63151 447 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 KIF5AQ12840 1032 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 THOC5Q13769 683 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 RPS6KA1Q15418 735 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 ZNF750Q32MQ0 723 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 XKR6Q5GH73 641 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 RBM20Q5T481 1227 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 KIAA0930Q6ICG6 404 aaPredicted RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 IL20RBQ6UXL0 311 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 WDR53Q7Z5U6 358 aaPredicted RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 TGIF2LYQ8IUE0 185 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 AGGF1Q8N302 714 aaeCLIP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 TMEM52Q8NDY8 209 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 NFAM1Q8NET5 270 aaPredicted RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 ASB5Q8WWX0 329 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 NCLNQ969V3 563 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 PDLIM2Q96JY6 352 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 POLDIP3Q9BY77 421 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 AICDAQ9GZX7 198 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 CCDC68Q9H2F9 335 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 TP63Q9H3D4 680 aaPredicted RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 EIF2B3Q9NR50 452 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 ZNF358Q9NW07 568 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 GUCA1BQ9UMX6 200 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 ERVK-11Q9UQG0 969 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 DRG1Q9Y295 367 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 KLF13Q9Y2Y9 288 aaPredicted RBP10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 FBN3Q75N90 2809 aa10.89□□□□□ -0.67
NSMCE1-202ENST00000561960 ZANQ9Y493 2812 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 KCNE1BA0A087WTH5 132 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 A0A0G2JNJ9 132 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 A0A1B0GTL3 188 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 FAM237BA0A1B0GVD1 139 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 KDM4EB2RXH2 506 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 WWP2O00308 870 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 BANF1O75531 89 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 OR2J2O76002 312 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 OR6B1O95007 311 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 LRATO95237 230 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 HOXD4P09016 255 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 ALOX12P18054 663 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 CXCR5P32302 372 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 MAGEA5P43359 124 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 CDKN2DP55273 166 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 TIAL1Q01085 375 aaKnown RBP eCLIP10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 GPS1Q13098 491 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 GXYLT1Q4G148 440 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 TOR1AIP1Q5JTV8 583 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 CES4AQ5XG92 561 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 CAND1Q86VP6 1230 aaKnown RBP10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 TMEM139Q8IV31 216 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 VWA5B2Q8N398 1253 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 ZNF321PQ8N8H1 164 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 FAM47BQ8NA70 645 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 APCDD1LQ8NCL9 501 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 DOK4Q8TEW6 326 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 LINGO1Q96FE5 620 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 OR4K3Q96R72 315 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 OR1F2PQ96R84 312 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 BAG1Q99933 345 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 IARS2Q9NSE4 1012 aaKnown RBP10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 C20orf96Q9NUD7 363 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 SAMD15Q9P1V8 674 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 ZFATQ9P243 1243 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 Q9UFV3 132 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 IKZF3Q9UKT9 509 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 DHRS7Q9Y394 339 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 L3MBTL1Q9Y468 752 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 FAM215AQ9Y5M1 114 aa10.88□□□□□ -0.67
NSMCE1-202ENST00000561960 ATP6AP2A0A1C7CYW4 349 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms