RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PEX11GQ96HA9 241 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 SMIM10Q96HG1 83 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 ATOH8Q96SQ7 321 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 CYTH2Q99418 400 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 AIF1LQ9BQI0 150 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 ILKAPQ9H0C8 392 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 EPB41L4BQ9H329 900 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 KLHL31Q9H511 634 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 SLAMF7Q9NQ25 335 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 IGSF5Q9NSI5 407 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 WWOXQ9NZC7 414 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 KCNE2Q9Y6J6 123 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 IGHV3-20A0A0C4DH32 117 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 SEC24DO94855 1032 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-224ENST00000556737 SERPIND1P05546 499 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 INHBAP08476 426 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 C1GALT1C1LP0DN25 315 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 GNAZP19086 355 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 TFEBP19484 476 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 HNRNPH1P31943 449 aaKnown RBP9.73□□□□□ -0.85
SHMT2-224ENST00000556737 MSH2P43246 934 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 TSFMP43897 325 aaKnown RBP9.73□□□□□ -0.85
SHMT2-224ENST00000556737 HSPA7P48741 367 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 IRF9Q00978 393 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 RGS1Q08116 209 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 ZNF844Q08AG5 666 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 BMPR2Q13873 1038 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 E2F2Q14209 437 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 TOR1AIP1Q5JTV8 583 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 ISLR2Q6UXK2 745 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 LINC00696Q6ZRV3 163 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 RIPOR1Q6ZS17 1223 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 CROCCP2Q86T23 111 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 ISCA2Q86U28 154 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 TBC1D19Q8N5T2 526 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 SIRT6Q8N6T7 355 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 EFCAB3Q8N7B9 438 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 TRPV3Q8NET8 790 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 UBTD2Q8WUN7 234 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 TSLPQ969D9 159 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 ESAMQ96AP7 390 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 WDR34Q96EX3 536 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 OR1F2PQ96R84 312 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 BARD1Q99728 777 aaKnown RBP9.73□□□□□ -0.85
SHMT2-224ENST00000556737 TUBB6Q9BUF5 446 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 EHD1Q9H4M9 534 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 ACSS3Q9H6R3 686 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 EPS8L2Q9H6S3 715 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 ALG9Q9H6U8 611 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 DNAJC11Q9NVH1 559 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 ASF1BQ9NVP2 202 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 GPRC5BQ9NZH0 403 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 NUDT4Q9NZJ9 180 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 PTGFRNQ9P2B2 879 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 TBK1Q9UHD2 729 aa9.73□□□□□ -0.85
SHMT2-224ENST00000556737 PTBP2Q9UKA9 531 aaKnown RBP9.73□□□□□ -0.85
SHMT2-224ENST00000556737 MAGEB17A8MXT2 336 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 TCP11X1B4DZS4 312 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 E2F3O00716 465 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 RGS16O15492 202 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 CHST10O43529 356 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 KERAO60938 352 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 VPS4BO75351 444 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 STK16O75716 305 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 CDC123O75794 336 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 ALDOAP04075 364 aaKnown RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 FHP07954 510 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 SERPINA6P08185 405 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 MTHFD2P13995 350 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 CRABP2P29373 138 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 HNF4AP41235 474 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 AGTR2P50052 363 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 RAB8AP61006 207 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 MRPL49Q13405 166 aaKnown RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 ZNF169Q14929 603 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 ABRAXAS2Q15018 415 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 RBBP5Q15291 538 aaKnown RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 PDK4Q16654 411 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 ADPRMQ3LIE5 342 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 MFSD4BQ5TF39 518 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 IRAK1BP1Q5VVH5 260 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 B3GNTL1Q67FW5 361 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 PLAG1Q6DJT9 500 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 SULT1C3Q6IMI6 304 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 ABHD13Q7L211 337 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 TAOK1Q7L7X3 1001 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 CPEB2Q7Z5Q1 589 aaKnown RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 CA13Q8N1Q1 262 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 CISD2Q8N5K1 135 aaKnown RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 KCTD4Q8WVF5 259 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 EXT2Q93063 718 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 TBC1D20Q96BZ9 403 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 PAFAH2Q99487 392 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 NT5DC2Q9H857 520 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 SNX15Q9NRS6 342 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 CD274Q9NZQ7 290 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 C19orf25Q9UFG5 118 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-224ENST00000556737 RNF112Q9ULX5 631 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 VPS4AQ9UN37 437 aa9.72□□□□□ -0.85
SHMT2-224ENST00000556737 IGKV3D-11A0A0A0MRZ8 115 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms