RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CCDC138Q96M89 665 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 TRIM54Q9BYV2 358 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 DRC3Q9H069 523 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 C12orf65Q9H3J6 166 aaKnown RBP12.71□□□□□ -0.37
NUP188-211ENST00000550219 ENAMQ9NRM1 1142 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 C14orf105Q9NVL8 296 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 UTP6Q9NYH9 597 aaKnown RBP12.71□□□□□ -0.37
NUP188-211ENST00000550219 SLC17A7Q9P2U7 560 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 RNF112Q9ULX5 631 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 OSGIN2Q9Y236 505 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 TMEM120BA0PK00 339 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 G3V2L1 256 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 H3BQF6 201 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 ZWINTO95229 277 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 HIST1H2AGP0C0S8 130 aaPredicted RBP12.7□□□□□ -0.38
NUP188-211ENST00000550219 PRR35P0CG20 571 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 DHRS4L1P0CG22 281 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 EZRP15311 586 aaKnown RBP12.7□□□□□ -0.38
NUP188-211ENST00000550219 HIST1H2ADP20671 130 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 HSD17B2P37059 387 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 PRDX1Q06830 199 aaKnown RBP12.7□□□□□ -0.38
NUP188-211ENST00000550219 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 MFSD4BQ5TF39 518 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 B3GNTL1Q67FW5 361 aaPredicted RBP12.7□□□□□ -0.38
NUP188-211ENST00000550219 ZNF425Q6IV72 752 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 AMER3Q8N944 861 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 OR1N1Q8NGS0 311 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 RDH11Q8TC12 318 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 RHBDF1Q96CC6 855 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 FBXL8Q96CD0 374 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 MVB12AQ96EY5 273 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 HIST1H2AHQ96KK5 128 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 FAM111AQ96PZ2 611 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 OR2A5Q96R48 311 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 HIST1H2AJQ99878 128 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 H2AFJQ9BTM1 129 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 IQCGQ9H095 443 aaKnown RBP12.7□□□□□ -0.38
NUP188-211ENST00000550219 KCNK9Q9NPC2 374 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 RIC8BQ9NVN3 520 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 PLA2G3Q9NZ20 509 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 NUDT4Q9NZJ9 180 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 CPSF2Q9P2I0 782 aaKnown RBP12.7□□□□□ -0.38
NUP188-211ENST00000550219 PTBP2Q9UKA9 531 aaKnown RBP12.7□□□□□ -0.38
NUP188-211ENST00000550219 TMCO1Q9UM00 188 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 SEC16AO15027 2179 aa12.7□□□□□ -0.38
NUP188-211ENST00000550219 UTP20O75691 2785 aaKnown RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 ICE1Q9Y2F5 2266 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 IGLV3-12A0A075B6K2 115 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 IGHV1-45A0A0A0MS14 117 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 DYTNA2CJ06 578 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 E7ENX8 843 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 UBXN8O00124 270 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 IMPA1P29218 277 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 GGT5P36269 586 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 DCTP40126 519 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 HNMTP50135 292 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 TBPL1P62380 186 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 TAP2Q03519 686 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 ZXDCQ2QGD7 858 aaPredicted RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 GARNL3Q5VVW2 1013 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 ATG9BQ674R7 924 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 SULT1C3Q6IMI6 304 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 ZYG11AQ6WRX3 759 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 FRA10AC1Q70Z53 315 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 NDUFAF7Q7L592 441 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 ZC3H7AQ8IWR0 971 aaKnown RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 LRRC56Q8IYG6 542 aaPredicted RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 ARMC2Q8NEN0 867 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 ZCCHC10Q8TBK6 192 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 FAR1Q8WVX9 515 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 BARD1Q99728 777 aaKnown RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 MKKSQ9NPJ1 570 aaPredicted RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 CCDC177Q9NQR7 707 aaPredicted RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 OLAHQ9NV23 265 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 ARL15Q9NXU5 204 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 FAM53CQ9NYF3 392 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 MID2Q9UJV3 735 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 MKL2Q9ULH7 1088 aa12.69□□□□□ -0.38
NUP188-211ENST00000550219 MRPS2Q9Y399 296 aaKnown RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 SPTAN1Q13813 2472 aaKnown RBP12.69□□□□□ -0.38
NUP188-211ENST00000550219 H7BY64 318 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 TAPBPO15533 448 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 LRRTM2O43300 516 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 FOXS1O43638 330 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 DLX3O60479 287 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 WFS1O76024 890 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 GUCA1CO95843 209 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 EDN3P14138 238 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 TAC1P20366 129 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 ATP5F1P24539 256 aaPredicted RBP12.68□□□□□ -0.38
NUP188-211ENST00000550219 AVPR1BP47901 424 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 EMP3P54852 163 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 WDR4P57081 412 aaKnown RBP12.68□□□□□ -0.38
NUP188-211ENST00000550219 PPP2R2AP63151 447 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 SNRPNP63162 240 aaKnown RBP12.68□□□□□ -0.38
NUP188-211ENST00000550219 ABATP80404 500 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 NDUFA9Q16795 377 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 MINDY4Q4G0A6 757 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 MBOAT1Q6ZNC8 495 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 KLHDC8AQ8IYD2 350 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms