RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 VPS29Q9UBQ0 182 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 CD84Q9UIB8 345 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 PRAMEF33A0A0G2JMD5 474 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 E7EQ34 232 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 PRAMEF10O60809 474 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 ENTPD6O75354 484 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 AKR1A1P14550 325 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 CYP2A7P20853 494 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 PRPH2P23942 346 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 SLC6A12P48065 614 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 MVDP53602 400 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 OLR1P78380 273 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 RAE1P78406 368 aaKnown RBP13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 HYAL2Q12891 473 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 TMPRSS11AQ6ZMR5 421 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 VN1R5Q7Z5H4 357 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 CPA6Q8N4T0 437 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 LMNTD1Q8N9Z9 388 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 AQP11Q8NBQ7 271 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 OR4A15Q8NGL6 344 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 UBASH3BQ8TF42 649 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 TMEM203Q969S6 136 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 TMCO6Q96DC7 493 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 SAMD11Q96NU1 681 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 FAM120CQ9NX05 1096 aaKnown RBP13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 PLK4O00444 970 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 SCAMP2O15127 329 aaKnown RBP13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 CYP17A1P05093 508 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 CHMP24386 653 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 TIE1P35590 1138 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 PFN3P60673 137 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 GPLD1P80108 840 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 IRF8Q02556 426 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 ACSM2AQ08AH3 577 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 XKR6Q5GH73 641 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 ADGRF1Q5T601 910 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 CPTPQ5TA50 214 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 ACSM2BQ68CK6 577 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 ST13P5Q8NFI4 369 aaPredicted RBP13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 CRELD1Q96HD1 420 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 SRRQ9GZT4 340 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 DYRK4Q9NR20 520 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 ACER3Q9NUN7 267 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 KCTD5Q9NXV2 234 aa13.37□□□□□ -0.27
SCNN1A-215ENST00000540037 A0A0G2JMP0 313 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 ALX3O95076 343 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 ANXA8P13928 327 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 PXNP49023 591 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 HBA1P69905 142 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 EIF4HQ15056 248 aaKnown RBP13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 GGTA1PQ4G0N0 100 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 PLAG1Q6DJT9 500 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 LRRC70Q7Z2Q7 622 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 C11orf65Q8NCR3 313 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 CLIP3Q96DZ5 547 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 CDCA4Q9BXL8 241 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 C11orf54Q9H0W9 315 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 Q9Y3F1 56 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 PCDHGB2Q9Y5G2 931 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 PCM1Q15154 2024 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 ZNF840PA6NDX5 716 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 RFXAPO00287 272 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 PLD2O14939 933 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 UGT2B17O75795 530 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 CCNB2O95067 398 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 HIST1H2AGP0C0S8 130 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 HIST1H2ADP20671 130 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 CD72P21854 359 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 CA8P35219 290 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 PCGF2P35227 344 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 MC1RQ01726 317 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 ABRQ12979 859 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 GPR17Q13304 367 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 MSANTD1Q6ZTZ1 278 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 NPAS3Q8IXF0 933 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 CELF5Q8N6W0 485 aaKnown RBP13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 ASB11Q8WXH4 323 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 CIDECQ96AQ7 238 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 HIST1H2AHQ96KK5 128 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 VPS35Q96QK1 796 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 HIST1H2AJQ99878 128 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 H2AFJQ9BTM1 129 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 SLC12A9Q9BXP2 914 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 ABCB9Q9NP78 766 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 DNAJC11Q9NVH1 559 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 CRNNQ9UBG3 495 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 EXO1Q9UQ84 846 aaKnown RBP13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 TRAPPC4Q9Y296 219 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 MAP4K5Q9Y4K4 846 aa13.36□□□□□ -0.27
SCNN1A-215ENST00000540037 A0A0X1KG70 313 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 CA12O43570 354 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 CPNE3O75131 537 aaKnown RBP13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 CSO75390 466 aaKnown RBP13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 ARHGEF15O94989 841 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 ASGR1P07306 291 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms