RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 SLC5A11Q8WWX8 675 aa14.45□□□□□ -0.1
MRPS28-209ENST00000522987 MTFMTQ96DP5 389 aaKnown RBP14.45□□□□□ -0.1
MRPS28-209ENST00000522987 OSBPL9Q96SU4 736 aa14.45□□□□□ -0.1
MRPS28-209ENST00000522987 TRIM51Q9BSJ1 452 aa14.45□□□□□ -0.1
MRPS28-209ENST00000522987 TRIM54Q9BYV2 358 aa14.45□□□□□ -0.1
MRPS28-209ENST00000522987 DDX47Q9H0S4 455 aaKnown RBP14.45□□□□□ -0.1
MRPS28-209ENST00000522987 PLAC1Q9HBJ0 212 aa14.45□□□□□ -0.1
MRPS28-209ENST00000522987 JRKLQ9Y4A0 524 aa14.45□□□□□ -0.1
MRPS28-209ENST00000522987 CDC7O00311 574 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 NME2P1O60361 137 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 CDC40O60508 579 aaKnown RBP eCLIP14.44□□□□□ -0.1
MRPS28-209ENST00000522987 CLDN14O95500 239 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 NME2P22392 152 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 JAK1P23458 1154 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 PPP2R1BP30154 601 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 PTGER4P35408 488 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 ELK3P41970 407 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 SCTRP47872 440 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 NR0B1P51843 470 aaKnown RBP14.44□□□□□ -0.1
MRPS28-209ENST00000522987 GPR85P60893 370 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 REEP5Q00765 189 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 KRTCAP3Q53RY4 240 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 TEDDM1Q5T9Z0 273 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 C16orf47Q6ZP98 133 aaPredicted RBP14.44□□□□□ -0.1
MRPS28-209ENST00000522987 Q6ZPB1 254 aaPredicted RBP14.44□□□□□ -0.1
MRPS28-209ENST00000522987 FGD2Q7Z6J4 655 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 PCGF5Q86SE9 256 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 THOC6Q86W42 341 aaKnown RBP14.44□□□□□ -0.1
MRPS28-209ENST00000522987 DOLPP1Q86YN1 238 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 GHDCQ8N2G8 530 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 HORMAD2Q8N7B1 307 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 NT5CQ8TCD5 201 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 GRK7Q8WTQ7 553 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 FBXL8Q96CD0 374 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 AICDAQ9GZX7 198 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 LIN28AQ9H9Z2 209 aaKnown RBP14.44□□□□□ -0.1
MRPS28-209ENST00000522987 PNO1Q9NRX1 252 aaKnown RBP14.44□□□□□ -0.1
MRPS28-209ENST00000522987 ZFP69BQ9UJL9 534 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 DYRK1BQ9Y463 629 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 PCDHGB6Q9Y5F9 930 aa14.44□□□□□ -0.1
MRPS28-209ENST00000522987 PHF3Q92576 2039 aaKnown RBP14.44□□□□□ -0.1
MRPS28-209ENST00000522987 TRBV11-1A0A0K0K1C0 115 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 GOLGA6L10A0A0M3HER8 536 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 SAGE2PA6NJ88 616 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 PSMD12O00232 456 aaPredicted RBP14.43□□□□□ -0.1
MRPS28-209ENST00000522987 PDE9AO76083 593 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 MLYCDO95822 493 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 RNH1P13489 461 aaKnown RBP14.43□□□□□ -0.1
MRPS28-209ENST00000522987 IL10P22301 178 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 CYB561P49447 251 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 MEOX1P50221 254 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 MLF1P58340 268 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 PWP1Q13610 501 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 ABHD13Q7L211 337 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 ANKMY2Q8IV38 441 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 CEP97Q8IW35 865 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 CHERPQ8IWX8 916 aaKnown RBP14.43□□□□□ -0.1
MRPS28-209ENST00000522987 CA13Q8N1Q1 262 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 TBC1D19Q8N5T2 526 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 CCT6BQ92526 530 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 SDCCAG3Q96C92 435 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 PDLIM2Q96JY6 352 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 NAP1L3Q99457 506 aaPredicted RBP14.43□□□□□ -0.1
MRPS28-209ENST00000522987 EGFL8Q99944 293 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 WDR83Q9BRX9 315 aaKnown RBP14.43□□□□□ -0.1
MRPS28-209ENST00000522987 DEFB126Q9BYW3 111 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 ZFATQ9P243 1243 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 FBXW2Q9UKT8 454 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 PPT2Q9UMR5 302 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 SLC22A14Q9Y267 594 aa14.43□□□□□ -0.1
MRPS28-209ENST00000522987 CCDC168Q8NDH2 2452 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 TACC2O95359 2948 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 A0A1B0GTH9 108 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 TFECO14948 347 aaPredicted RBP14.42□□□□□ -0.1
MRPS28-209ENST00000522987 MYO1DO94832 1006 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 TTC4O95801 387 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 TPOP07202 933 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 GDF5P43026 501 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 FNTAP49354 379 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 AP1S2P56377 157 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 BTN3A2P78410 334 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 FBXO48Q5FWF7 155 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 FAM45BPQ6NSW5 357 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 SBSNQ6UWP8 590 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 QSOX2Q6ZRP7 698 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 CD163Q86VB7 1156 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 CNTN4Q8IWV2 1026 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 NFAM1Q8NET5 270 aaPredicted RBP14.42□□□□□ -0.1
MRPS28-209ENST00000522987 GABPB2Q8TAK5 448 aaPredicted RBP14.42□□□□□ -0.1
MRPS28-209ENST00000522987 FAM45AQ8TCE6 357 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 ATL1Q8WXF7 558 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 TMEM125Q96AQ2 219 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 AIF1LQ9BQI0 150 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 FAM129AQ9BZQ8 928 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 SLC6A16Q9GZN6 736 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 GPAMQ9HCL2 828 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 PRDM9Q9NQV7 894 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 VWA7Q9Y334 891 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 ASB1Q9Y576 335 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 PSAT1Q9Y617 370 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms